Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 RN7SKP16-201ENST00000410180 299 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AL138899.2-201ENST00000439139 499 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 TCEA1P3-201ENST00000443005 880 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AP000281.1-201ENST00000444036 316 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 MTND4LP12-201ENST00000448237 295 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AP000942.1-201ENST00000463969 747 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AC100832.1-201ENST00000471945 383 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 RN7SL273P-201ENST00000481561 299 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 HMGB1P40-201ENST00000525121 540 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 RPL10P14-201ENST00000565265 298 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 AC009597.2-201ENST00000604659 592 ntBASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
CLHC1Q8NHS4 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC114947.2-201ENST00000565748 2125 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLHC1Q8NHS4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLHC1Q8NHS4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLHC1Q8NHS4 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CLHC1Q8NHS4 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLHC1Q8NHS4 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 RNA5SP487-201ENST00000410186 122 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 RN7SKP286-201ENST00000410894 299 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 MTND4LP21-201ENST00000415303 295 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 DSTNP5-201ENST00000427921 523 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC046176.1-201ENST00000435260 1170 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 UBE2V2P4-201ENST00000447495 259 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC079168.1-201ENST00000458741 345 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC008410.1-201ENST00000483777 339 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 RPEP1-201ENST00000504507 658 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AP001804.2-201ENST00000533932 910 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 MIR4472-2-201ENST00000582069 67 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC010245.2-201ENST00000606908 1167 ntBASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5□□□□□ -1.61
CLHC1Q8NHS4 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5□□□□□ -1.61
CLHC1Q8NHS4 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 RN7SKP124-201ENST00000364730 341 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 CYCSP6-201ENST00000434498 302 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 HMGB3P10-201ENST00000434734 572 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 GAPDHP58-201ENST00000438477 1006 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AL161636.2-201ENST00000445179 927 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 RPL31P15-201ENST00000449770 338 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC021660.1-201ENST00000465006 554 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC016687.1-201ENST00000482574 353 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 RNA5SP373-201ENST00000517271 95 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 NDUFA5P11-201ENST00000567995 343 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC008814.1-201ENST00000603797 406 ntBASIC4.99□□□□□ -1.61
CLHC1Q8NHS4 AC104695.2-201ENST00000605056 775 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms