Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 GAPDHP58-201ENST00000438477 1006 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC092647.2-201ENST00000452998 253 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC090114.3-201ENST00000479267 829 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC093827.1-201ENST00000480094 861 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC004453.1-201ENST00000487895 408 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 RPL32P9-201ENST00000487963 407 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC022616.2-201ENST00000523185 300 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 BMPR1APS2-201ENST00000527904 1012 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 APPL2-203ENST00000546731 684 ntTSL 2 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC107993.1-201ENST00000591343 684 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC008814.1-201ENST00000603797 406 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 OR5AQ1P-202ENST00000641257 1534 ntBASIC6.24□□□□□ -1.41
CTR9Q6PD62 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
CTR9Q6PD62 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CTR9Q6PD62 LARS-201ENST00000274562 2213 ntTSL 2 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 RNA5SP90-201ENST00000364801 99 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 AL645927.1-201ENST00000396783 406 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 OR13Z1P-201ENST00000416141 834 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 AL691447.1-201ENST00000419456 387 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 NPM1P22-201ENST00000427761 952 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 PSMD10P3-201ENST00000437000 448 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 NPM1P29-201ENST00000483112 803 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 GTF2F2P1-201ENST00000511083 675 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 RNU6-1334P-201ENST00000516032 105 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC012400.1-201ENST00000518452 381 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 OR10D4P-201ENST00000525892 951 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 MIR7853-201ENST00000584820 132 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC037198.3-201ENST00000616754 526 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC099494.2-201ENST00000623371 978 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC021242.1-201ENST00000507315 2035 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 AC011755.1-201ENST00000623763 2049 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CTR9Q6PD62 CR383656.5-201ENST00000547616 1340 ntBASIC6.23□□□□□ -1.41
CTR9Q6PD62 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CTR9Q6PD62 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 RN7SKP145-201ENST00000363291 303 ntBASIC6.22□□□□□ -1.41
CTR9Q6PD62 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC6.22□□□□□ -1.41
CTR9Q6PD62 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 SNORA70.6-201ENST00000383934 134 ntBASIC6.22□□□□□ -1.41
CTR9Q6PD62 MIR600-201ENST00000385007 98 ntBASIC6.22□□□□□ -1.41
CTR9Q6PD62 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CTR9Q6PD62 MIR1182-201ENST00000408363 97 ntBASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms