Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC006427.1-201ENST00000514359 712 ntBASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 BNIP3P1-201ENST00000547295 580 ntBASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 TTC39DP-201ENST00000416781 1688 ntBASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
SHROOM1Q2M3G4 AC016745.2-201ENST00000608834 3443 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC007996.1-201ENST00000620414 2821 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 RNA5SP191-201ENST00000362585 102 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 RNA5SP87-201ENST00000384155 118 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 RPL36AP15-201ENST00000444514 266 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 SEPT10P1-201ENST00000517342 1162 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC009962.1-201ENST00000567327 3813 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC000095.2-202ENST00000637415 154 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 AC020656.2-201ENST00000613291 5309 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 OR9K1P-202ENST00000641111 3217 ntBASIC6.03□□□□□ -1.44
SHROOM1Q2M3G4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
SHROOM1Q2M3G4 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 DDX39BP1-205ENST00000422507 192 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AL034379.1-201ENST00000423216 253 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC099670.2-201ENST00000435130 321 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 KNOP1P3-201ENST00000446933 426 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 RN7SL814P-201ENST00000487715 300 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC010350.1-201ENST00000504908 231 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 MORF4L1P3-201ENST00000525966 950 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 MIR4330-201ENST00000579077 105 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AL133406.3-201ENST00000606817 541 ntBASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC6.02□□□□□ -1.45
SHROOM1Q2M3G4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms