Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.34□□□□□ -1.71
SPCS3P61009 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.34□□□□□ -1.71
SPCS3P61009 VWA8P1-201ENST00000510889 176 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 MTND6P2-201ENST00000512226 524 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC4.34□□□□□ -1.71
SPCS3P61009 RNU6-615P-201ENST00000516065 106 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 KCTD9P6-201ENST00000522306 950 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 AC090819.1-201ENST00000523800 1111 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.34□□□□□ -1.71
SPCS3P61009 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.34□□□□□ -1.71
SPCS3P61009 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.34□□□□□ -1.71
SPCS3P61009 CCDC58P1-201ENST00000578567 430 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 RN7SL356P-201ENST00000582228 248 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
SPCS3P61009 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPCS3P61009 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.34□□□□□ -1.71
SPCS3P61009 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPCS3P61009 AP000769.2-201ENST00000602344 396 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 HTR1DP1-201ENST00000616500 888 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.34□□□□□ -1.71
SPCS3P61009 AL158062.1-201ENST00000619632 745 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC4.34□□□□□ -1.71
SPCS3P61009 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
SPCS3P61009 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.34□□□□□ -1.71
SPCS3P61009 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.34□□□□□ -1.71
SPCS3P61009 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
SPCS3P61009 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPCS3P61009 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC4.34□□□□□ -1.72
SPCS3P61009 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPCS3P61009 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
SPCS3P61009 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
SPCS3P61009 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC4.33□□□□□ -1.72
SPCS3P61009 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 AC107021.2-201ENST00000567714 2095 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 IFIT1P1-201ENST00000400497 1449 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SPCS3P61009 RNA5SP502-201ENST00000362694 119 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AC005522.1-201ENST00000395416 346 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 RPS3AP2-201ENST00000407190 754 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 AL354893.1-201ENST00000433735 348 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 OR6D1P-201ENST00000436165 939 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AL512637.1-201ENST00000439523 1231 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 EEF1B2P3-201ENST00000447718 678 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AL121877.1-201ENST00000453704 622 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AP000547.1-201ENST00000454360 617 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 RPS23P6-201ENST00000466136 431 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AC092754.1-201ENST00000472975 479 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AC122718.2-201ENST00000505325 591 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC027369.2-201ENST00000528030 440 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC015802.2-201ENST00000589690 189 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC007390.2-201ENST00000606229 3803 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC4.33□□□□□ -1.72
SPCS3P61009 MIR6839-201ENST00000620425 113 ntBASIC4.33□□□□□ -1.72
SPCS3P61009 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
SPCS3P61009 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.33□□□□□ -1.72
SPCS3P61009 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.33□□□□□ -1.72
SPCS3P61009 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SPCS3P61009 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.33□□□□□ -1.72
SPCS3P61009 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 CR382285.2-201ENST00000624662 1495 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 CR383656.5-201ENST00000547616 1340 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.32□□□□□ -1.72
SPCS3P61009 MIR375-201ENST00000362103 64 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 RNA5SP132-201ENST00000364725 118 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SPCS3P61009 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 OR2X1P-201ENST00000421144 687 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AC127526.2-201ENST00000426436 775 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 AC005297.1-201ENST00000444765 862 ntBASIC4.32□□□□□ -1.72
SPCS3P61009 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.32□□□□□ -1.72
SPCS3P61009 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC4.32□□□□□ -1.72
SPCS3P61009 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms