Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
VSX2P58304 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 AC073136.1-201ENST00000449426 2884 ntBASIC4.98□□□□□ -1.61
VSX2P58304 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VSX2P58304 CR383656.5-201ENST00000547616 1340 ntBASIC4.98□□□□□ -1.61
VSX2P58304 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.98□□□□□ -1.61
VSX2P58304 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.98□□□□□ -1.61
VSX2P58304 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 RNA5SP507-201ENST00000363603 121 ntBASIC4.98□□□□□ -1.61
VSX2P58304 SNORA74A-201ENST00000364089 198 ntBASIC4.98□□□□□ -1.61
VSX2P58304 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 U3.36-201ENST00000408418 213 ntBASIC4.98□□□□□ -1.61
VSX2P58304 EI24P4-201ENST00000423683 1078 ntBASIC4.98□□□□□ -1.61
VSX2P58304 RPL7AP49-201ENST00000429522 581 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AL591438.1-201ENST00000433508 581 ntBASIC4.98□□□□□ -1.61
VSX2P58304 RPL19P16-201ENST00000433839 588 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AL161722.2-201ENST00000434731 981 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.98□□□□□ -1.61
VSX2P58304 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.98□□□□□ -1.61
VSX2P58304 CBX1P2-201ENST00000453841 458 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AC008410.1-201ENST00000483777 339 ntBASIC4.98□□□□□ -1.61
VSX2P58304 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 RPS12P31-201ENST00000491419 398 ntBASIC4.98□□□□□ -1.61
VSX2P58304 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.98□□□□□ -1.61
VSX2P58304 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 OR4A46P-201ENST00000527255 933 ntBASIC4.98□□□□□ -1.61
VSX2P58304 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 AC044860.2-201ENST00000561005 179 ntBASIC4.98□□□□□ -1.61
VSX2P58304 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.98□□□□□ -1.61
VSX2P58304 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.98□□□□□ -1.61
VSX2P58304 AC007066.2-202ENST00000566531 914 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.98□□□□□ -1.61
VSX2P58304 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 AC008814.1-201ENST00000603797 406 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AC011626.1-201ENST00000604710 562 ntBASIC4.98□□□□□ -1.61
VSX2P58304 TAS2R6P-201ENST00000605022 826 ntBASIC4.98□□□□□ -1.61
VSX2P58304 AL162574.1-201ENST00000615702 950 ntBASIC4.98□□□□□ -1.61
VSX2P58304 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 AC099494.2-201ENST00000623371 978 ntBASIC4.98□□□□□ -1.61
VSX2P58304 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
VSX2P58304 PCAT14-202ENST00000627127 3935 ntBASIC4.98□□□□□ -1.61
VSX2P58304 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VSX2P58304 AC023421.1-201ENST00000590535 1785 ntBASIC4.98□□□□□ -1.61
VSX2P58304 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
VSX2P58304 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
VSX2P58304 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.97□□□□□ -1.61
VSX2P58304 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
VSX2P58304 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.97□□□□□ -1.61
VSX2P58304 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
VSX2P58304 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VSX2P58304 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.97□□□□□ -1.61
VSX2P58304 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VSX2P58304 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VSX2P58304 RNU6-249P-201ENST00000363016 102 ntBASIC4.97□□□□□ -1.61
VSX2P58304 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VSX2P58304 SNORA70-201ENST00000384436 135 ntBASIC4.97□□□□□ -1.61
VSX2P58304 MIR589-201ENST00000385238 99 ntBASIC4.97□□□□□ -1.61
VSX2P58304 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.97□□□□□ -1.61
VSX2P58304 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC010740.1-201ENST00000417035 684 ntBASIC4.97□□□□□ -1.61
VSX2P58304 RPS4XP16-201ENST00000427198 791 ntBASIC4.97□□□□□ -1.61
VSX2P58304 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.97□□□□□ -1.61
VSX2P58304 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.97□□□□□ -1.61
VSX2P58304 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.97□□□□□ -1.61
VSX2P58304 PTMAP6-201ENST00000439110 327 ntBASIC4.97□□□□□ -1.61
VSX2P58304 RPSAP41-201ENST00000439695 860 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC016772.1-201ENST00000444170 1261 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.97□□□□□ -1.61
VSX2P58304 AC108161.1-201ENST00000461060 402 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VSX2P58304 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.97□□□□□ -1.61
VSX2P58304 AC023424.1-201ENST00000496058 459 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.97□□□□□ -1.61
VSX2P58304 AC006427.1-201ENST00000514359 712 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.97□□□□□ -1.61
VSX2P58304 AC130364.2-201ENST00000528639 604 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC4.97□□□□□ -1.61
VSX2P58304 HMGN2P6-201ENST00000551091 273 ntBASIC4.97□□□□□ -1.61
VSX2P58304 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.97□□□□□ -1.61
VSX2P58304 RN7SL708P-201ENST00000580952 299 ntBASIC4.97□□□□□ -1.61
VSX2P58304 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VSX2P58304 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
VSX2P58304 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.97□□□□□ -1.61
VSX2P58304 AL356608.1-201ENST00000610034 820 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC009163.6-201ENST00000612367 342 ntBASIC4.97□□□□□ -1.61
VSX2P58304 AC010809.3-201ENST00000621310 641 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms