Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC068339.2-201ENST00000534395 618 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC022404.1-201ENST00000555320 273 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AL049872.1-201ENST00000556323 322 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AGGF1P7-201ENST00000562369 913 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 CASC22-201ENST00000569713 386 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC011503.2-201ENST00000594230 1500 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.1□□□□□ -1.59
CLDN20P56880 AC011445.2-201ENST00000599274 173 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AP003117.1-201ENST00000602771 554 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 FO393422.1-201ENST00000603908 708 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 AL159169.2-201ENST00000610061 1269 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 AC008115.3-201ENST00000614874 549 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CLDN20P56880 AL138955.1-201ENST00000622881 1040 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 AC011755.1-201ENST00000623763 2049 ntBASIC5.1□□□□□ -1.59
CLDN20P56880 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.1□□□□□ -1.59
CLDN20P56880 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.1□□□□□ -1.59
CLDN20P56880 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CLDN20P56880 PWAR1-201ENST00000624188 2414 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 MTND5P23-201ENST00000430812 1655 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN20P56880 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 RAD1P1-201ENST00000231383 813 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN20P56880 AC092642.1-201ENST00000392417 425 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 RN7SKP206-201ENST00000410823 293 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 OR6E1P-201ENST00000414424 923 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AL133482.1-201ENST00000415988 498 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 AL513325.1-201ENST00000417716 1034 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 AC092570.3-201ENST00000420113 693 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN20P56880 RPS7P6-201ENST00000485777 579 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC023424.1-201ENST00000496058 459 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN20P56880 SUMO2P4-201ENST00000504193 276 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC119751.4-201ENST00000507498 357 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 DUTP7-201ENST00000507982 486 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC021146.7-201ENST00000509604 775 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC106872.4-201ENST00000510050 523 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 SEPT10P1-201ENST00000517342 1162 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC020937.1-201ENST00000519677 1013 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN20P56880 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLDN20P56880 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.09□□□□□ -1.59
CLDN20P56880 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLDN20P56880 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CLDN20P56880 HIRAP1-201ENST00000605318 787 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 AC105105.5-201ENST00000622635 1294 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 CU639417.4-201ENST00000623928 207 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AL355480.1-201ENST00000629041 99 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.09□□□□□ -1.59
CLDN20P56880 MIR4302-201ENST00000638058 60 ntBASIC5.09□□□□□ -1.59
CLDN20P56880 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.09□□□□□ -1.59
CLDN20P56880 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLDN20P56880 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CLDN20P56880 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLDN20P56880 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLDN20P56880 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.09□□□□□ -1.6
CLDN20P56880 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN20P56880 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
CLDN20P56880 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
CLDN20P56880 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN20P56880 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.08□□□□□ -1.6
CLDN20P56880 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN20P56880 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms