Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN6P56747 AL161722.1-201ENST00000446972 1032 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 BX276092.8-201ENST00000455722 250 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 AC063943.1-201ENST00000465434 453 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 CR383656.1-201ENST00000484916 377 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 RN7SL423P-201ENST00000486202 304 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN6P56747 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN6P56747 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.05□□□□□ -1.6
CLDN6P56747 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN6P56747 AC084824.2-201ENST00000548906 345 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN6P56747 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 MIR4270-201ENST00000581799 70 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 SS18L2P2-201ENST00000583960 235 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.05□□□□□ -1.6
CLDN6P56747 AC234771.5-201ENST00000600161 514 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 AC015712.7-201ENST00000615211 635 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
CLDN6P56747 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CLDN6P56747 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.05□□□□□ -1.6
CLDN6P56747 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.05□□□□□ -1.6
CLDN6P56747 AC109446.4-201ENST00000623235 2755 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN6P56747 U3.3-201ENST00000362986 216 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 RN7SKP113-201ENST00000363891 295 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 RNU1-136P-201ENST00000384181 164 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 RNGTTP1-201ENST00000420965 728 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN6P56747 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN6P56747 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC009963.2-201ENST00000453431 138 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AC097484.1-201ENST00000471148 389 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN6P56747 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN6P56747 GLUD1P3-202ENST00000508551 200 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN6P56747 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN6P56747 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN6P56747 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.04□□□□□ -1.6
CLDN6P56747 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 NANOGP3-201ENST00000605855 286 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 RNU6-84P-201ENST00000607737 102 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AC083809.1-201ENST00000615051 472 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AL356752.1-201ENST00000615844 593 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AC112694.2-201ENST00000623697 768 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AC005618.4-201ENST00000625053 554 ntBASIC5.04□□□□□ -1.6
CLDN6P56747 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN6P56747 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CLDN6P56747 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN6P56747 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CLDN6P56747 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
CLDN6P56747 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
CLDN6P56747 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CLDN6P56747 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN6P56747 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CLDN6P56747 MIR133A2-201ENST00000347538 102 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 RNA5SP191-201ENST00000362585 102 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 GLULP6-201ENST00000399502 913 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AL158827.1-201ENST00000416300 391 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AC069213.2-201ENST00000420238 366 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN6P56747 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN6P56747 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN6P56747 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.03□□□□□ -1.6
CLDN6P56747 ATP5LP5-201ENST00000483050 299 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.03□□□□□ -1.6
CLDN6P56747 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.03□□□□□ -1.6
CLDN6P56747 C1GALT1P3-201ENST00000522049 819 ntBASIC5.03□□□□□ -1.6
CLDN6P56747 AC122688.1-201ENST00000541494 223 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms