Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 TMSB4XP4-201ENST00000323496 618 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 ST13P16-201ENST00000401760 781 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 RNA5SP178-201ENST00000410380 128 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 Z93019.1-201ENST00000416450 973 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC079355.1-201ENST00000421770 223 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 AL161636.2-201ENST00000445179 927 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 MYO5BP2-201ENST00000449815 1277 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC026348.1-201ENST00000462549 1053 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 RNU6-513P-201ENST00000516104 104 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AL359219.2-201ENST00000555184 348 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 RBM22P12-201ENST00000567098 1255 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC027216.1-201ENST00000577726 685 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 MIR4505-201ENST00000582238 73 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.76□□□□□ -1.49
HDAC4P56524 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC013244.1-201ENST00000604279 193 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.76□□□□□ -1.49
HDAC4P56524 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.76□□□□□ -1.49
HDAC4P56524 RN7SL787P-201ENST00000613000 284 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC007683.2-201ENST00000624681 714 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.76□□□□□ -1.49
HDAC4P56524 AC103703.1-201ENST00000634783 663 ntBASIC5.76□□□□□ -1.49
HDAC4P56524 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
HDAC4P56524 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.76□□□□□ -1.49
HDAC4P56524 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC4P56524 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HDAC4P56524 U3.28-201ENST00000391249 210 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 SDHDP6-201ENST00000414693 480 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 NDUFB4P8-201ENST00000435351 367 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AC074367.1-201ENST00000438685 1125 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.75□□□□□ -1.49
HDAC4P56524 AC092106.1-201ENST00000444291 373 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.75□□□□□ -1.49
HDAC4P56524 IGBP1P3-201ENST00000447449 1000 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC4P56524 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 RPL5P22-201ENST00000480199 884 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 RN7SL273P-201ENST00000481561 299 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC4P56524 AC090543.1-201ENST00000492168 485 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AC112191.2-201ENST00000522428 333 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 OR4R2P-201ENST00000530815 597 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 OR4A43P-201ENST00000532938 908 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.75□□□□□ -1.49
HDAC4P56524 AP005262.1-201ENST00000582646 997 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC4P56524 AC012616.1-201ENST00000600294 197 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.75□□□□□ -1.49
HDAC4P56524 AL139124.1-201ENST00000609123 421 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AL118522.2-201ENST00000616045 615 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 AL512283.1-201ENST00000606756 1384 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 TCP1P3-201ENST00000414406 1498 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 AL359715.3-201ENST00000569267 2123 ntBASIC5.75□□□□□ -1.49
HDAC4P56524 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HDAC4P56524 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HDAC4P56524 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
HDAC4P56524 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
HDAC4P56524 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.74□□□□□ -1.49
HDAC4P56524 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms