Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.7□□□□□ -1.5
RAD23BP54727 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 AL356608.1-201ENST00000610034 820 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 MIR6886-201ENST00000619864 61 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AC106730.3-201ENST00000624568 641 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 SAMMSON-209ENST00000641222 1100 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.7□□□□□ -1.5
RAD23BP54727 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 AL031595.2-201ENST00000624215 19071 ntBASIC5.7□□□□□ -1.5
RAD23BP54727 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.7□□□□□ -1.5
RAD23BP54727 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
RAD23BP54727 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.69□□□□□ -1.5
RAD23BP54727 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.69□□□□□ -1.5
RAD23BP54727 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.69□□□□□ -1.5
RAD23BP54727 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC092642.1-201ENST00000392417 425 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.69□□□□□ -1.5
RAD23BP54727 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 RPS6P14-201ENST00000425165 719 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.69□□□□□ -1.5
RAD23BP54727 MTND2P25-201ENST00000449028 610 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.69□□□□□ -1.5
RAD23BP54727 RN7SL423P-201ENST00000486202 304 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 MTND3P3-201ENST00000505004 126 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 PGAM1P13-201ENST00000507497 754 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.69□□□□□ -1.5
RAD23BP54727 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.69□□□□□ -1.5
RAD23BP54727 IMMP1LP3-201ENST00000604197 224 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 AC009027.1-201ENST00000604510 479 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 AP000864.1-201ENST00000609424 650 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 LINC00216-201ENST00000623548 1126 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 AL138960.2-201ENST00000625145 535 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 CASC19-264ENST00000641912 1184 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.69□□□□□ -1.5
RAD23BP54727 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RAD23BP54727 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.69□□□□□ -1.5
RAD23BP54727 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RAD23BP54727 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RAD23BP54727 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.69□□□□□ -1.5
RAD23BP54727 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RAD23BP54727 OR55B1P-203ENST00000641518 2602 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAD23BP54727 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RAD23BP54727 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAD23BP54727 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 SNORA51.1-201ENST00000363243 140 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 OR6K3-202ENST00000368146 996 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD23BP54727 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD23BP54727 RPS15AP29-201ENST00000445539 400 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC104634.1-201ENST00000452720 462 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 RPL7P6-201ENST00000480903 738 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 AC023424.1-201ENST00000496058 459 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
RAD23BP54727 RNU6-760P-201ENST00000516078 97 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 RNU6-467P-201ENST00000517027 110 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.68□□□□□ -1.5
RAD23BP54727 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RAD23BP54727 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RAD23BP54727 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.68□□□□□ -1.5
RAD23BP54727 AC106730.2-201ENST00000566641 540 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 MIR4489-201ENST00000578869 62 ntBASIC5.68□□□□□ -1.5
RAD23BP54727 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD23BP54727 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.68□□□□□ -1.5
RAD23BP54727 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms