Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 HSPA8P18-201ENST00000439846 1928 ntBASIC5.56□□□□□ -1.52
LHX1P48742 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
LHX1P48742 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
LHX1P48742 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 NAMPTP1-201ENST00000440465 2514 ntBASIC5.55□□□□□ -1.52
LHX1P48742 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
LHX1P48742 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
LHX1P48742 SNORA74A-201ENST00000364089 198 ntBASIC5.55□□□□□ -1.52
LHX1P48742 MIR589-201ENST00000385238 99 ntBASIC5.55□□□□□ -1.52
LHX1P48742 RNU11-201ENST00000387069 134 ntBASIC5.55□□□□□ -1.52
LHX1P48742 AL607077.1-201ENST00000401718 499 ntBASIC5.55□□□□□ -1.52
LHX1P48742 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.55□□□□□ -1.52
LHX1P48742 RAB9AP4-201ENST00000415230 609 ntBASIC5.55□□□□□ -1.52
LHX1P48742 AC007064.3-201ENST00000422608 359 ntBASIC5.55□□□□□ -1.52
LHX1P48742 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.55□□□□□ -1.52
LHX1P48742 AJ239321.1-201ENST00000424255 564 ntBASIC5.55□□□□□ -1.52
LHX1P48742 MRPS21P2-201ENST00000424704 264 ntBASIC5.55□□□□□ -1.52
LHX1P48742 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
LHX1P48742 RPL19P16-201ENST00000433839 588 ntBASIC5.55□□□□□ -1.52
LHX1P48742 PTMAP6-201ENST00000439110 327 ntBASIC5.55□□□□□ -1.52
LHX1P48742 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 NOP56P2-201ENST00000447491 769 ntBASIC5.55□□□□□ -1.52
LHX1P48742 MTND3P4-201ENST00000453537 303 ntBASIC5.55□□□□□ -1.52
LHX1P48742 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 AC097484.1-201ENST00000471148 389 ntBASIC5.55□□□□□ -1.52
LHX1P48742 GOLGA5P1-201ENST00000507317 980 ntBASIC5.55□□□□□ -1.52
LHX1P48742 RN7SKP66-201ENST00000516681 231 ntBASIC5.55□□□□□ -1.52
LHX1P48742 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 AC092490.3-201ENST00000545370 572 ntBASIC5.55□□□□□ -1.52
LHX1P48742 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.55□□□□□ -1.52
LHX1P48742 AL360012.1-201ENST00000602813 131 ntBASIC5.55□□□□□ -1.52
LHX1P48742 AC011626.1-201ENST00000604710 562 ntBASIC5.55□□□□□ -1.52
LHX1P48742 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LHX1P48742 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.55□□□□□ -1.52
LHX1P48742 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LHX1P48742 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LHX1P48742 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LHX1P48742 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
LHX1P48742 AC093671.1-201ENST00000624981 2929 ntBASIC5.54□□□□□ -1.52
LHX1P48742 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX1P48742 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LHX1P48742 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 MTHFD2P5-201ENST00000320415 844 ntBASIC5.54□□□□□ -1.52
LHX1P48742 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX1P48742 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 RNU1-106P-201ENST00000384382 164 ntBASIC5.54□□□□□ -1.52
LHX1P48742 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LHX1P48742 AL645927.1-201ENST00000396783 406 ntBASIC5.54□□□□□ -1.52
LHX1P48742 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LHX1P48742 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX1P48742 AC090804.1-201ENST00000448870 490 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AC073850.1-201ENST00000449243 255 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX1P48742 RPL7AP6-201ENST00000477943 801 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX1P48742 AC005000.1-201ENST00000536192 288 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AP002373.2-201ENST00000541631 1060 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX1P48742 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX1P48742 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.54□□□□□ -1.52
LHX1P48742 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX1P48742 AC087763.1-201ENST00000603391 286 ntBASIC5.54□□□□□ -1.52
LHX1P48742 LSM1P2-201ENST00000604911 322 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX1P48742 AC118658.2-201ENST00000618697 459 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AC068870.2-201ENST00000620635 389 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AP002799.1-201ENST00000623552 423 ntBASIC5.54□□□□□ -1.52
LHX1P48742 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.54□□□□□ -1.52
LHX1P48742 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
LHX1P48742 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LHX1P48742 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX1P48742 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.54□□□□□ -1.52
LHX1P48742 AC006210.2-201ENST00000367074 1545 ntBASIC5.53□□□□□ -1.52
LHX1P48742 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.53□□□□□ -1.52
LHX1P48742 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LHX1P48742 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LHX1P48742 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms