Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 COX6B1P5-201ENST00000509843 249 ntBASIC5.97□□□□□ -1.45
NEDD4P46934 AC147055.3-201ENST00000510547 851 ntBASIC5.97□□□□□ -1.45
NEDD4P46934 RN7SKP260-201ENST00000516907 149 ntBASIC5.97□□□□□ -1.45
NEDD4P46934 OR7E128P-201ENST00000532736 1024 ntBASIC5.97□□□□□ -1.45
NEDD4P46934 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
NEDD4P46934 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.97□□□□□ -1.45
NEDD4P46934 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEDD4P46934 AP002799.1-201ENST00000623552 423 ntBASIC5.97□□□□□ -1.45
NEDD4P46934 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.97□□□□□ -1.45
NEDD4P46934 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.97□□□□□ -1.45
NEDD4P46934 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
NEDD4P46934 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NEDD4P46934 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.96□□□□□ -1.45
NEDD4P46934 NCOA4P2-201ENST00000340589 1813 ntBASIC5.96□□□□□ -1.45
NEDD4P46934 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
NEDD4P46934 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
NEDD4P46934 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
NEDD4P46934 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.96□□□□□ -1.46
NEDD4P46934 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEDD4P46934 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
NEDD4P46934 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
NEDD4P46934 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.96□□□□□ -1.46
NEDD4P46934 NDUFA5P12-201ENST00000503796 343 ntBASIC5.96□□□□□ -1.46
NEDD4P46934 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.96□□□□□ -1.46
NEDD4P46934 MRPS33P2-201ENST00000507850 322 ntBASIC5.96□□□□□ -1.46
NEDD4P46934 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.96□□□□□ -1.46
NEDD4P46934 AP000619.2-201ENST00000546014 969 ntBASIC5.96□□□□□ -1.46
NEDD4P46934 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.96□□□□□ -1.46
NEDD4P46934 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.96□□□□□ -1.46
NEDD4P46934 EIF1P5-201ENST00000585002 234 ntBASIC5.96□□□□□ -1.46
NEDD4P46934 AC002069.2-201ENST00000603580 883 ntBASIC5.96□□□□□ -1.46
NEDD4P46934 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.96□□□□□ -1.46
NEDD4P46934 AC090510.2-201ENST00000617465 629 ntBASIC5.96□□□□□ -1.46
NEDD4P46934 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
NEDD4P46934 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
NEDD4P46934 AC003985.2-201ENST00000562268 1669 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 OR9K1P-202ENST00000641111 3217 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NEDD4P46934 THAP12P5-201ENST00000405864 2275 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.95□□□□□ -1.46
NEDD4P46934 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 RN7SKP95-201ENST00000362860 303 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 SNORA70.10-201ENST00000384515 134 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 ATP5HP3-201ENST00000396994 486 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 RPL21P67-201ENST00000402896 478 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 AL358178.1-201ENST00000407698 397 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 TXNP5-201ENST00000441043 315 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
NEDD4P46934 AL691482.1-201ENST00000453255 87 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 RPS17P2-201ENST00000461663 408 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.95□□□□□ -1.46
NEDD4P46934 OR5AZ1P-201ENST00000527448 943 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 AL512310.9-201ENST00000553311 948 ntBASIC5.95□□□□□ -1.46
NEDD4P46934 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD4P46934 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.95□□□□□ -1.46
NEDD4P46934 CR383656.5-201ENST00000547616 1340 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEDD4P46934 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
NEDD4P46934 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NEDD4P46934 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 AC007998.4-201ENST00000612496 2533 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD4P46934 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD4P46934 U3.23-201ENST00000391132 200 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 AL078599.1-201ENST00000402075 293 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.94□□□□□ -1.46
NEDD4P46934 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD4P46934 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 COX6CP13-201ENST00000428703 226 ntBASIC5.94□□□□□ -1.46
NEDD4P46934 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.94□□□□□ -1.46
NEDD4P46934 LYPLA1P1-201ENST00000434514 622 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms