Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL606490.7-201ENST00000433136 191 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 NDUFA5P1-201ENST00000433858 341 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 NDUFB4P8-201ENST00000435351 367 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 FMO7P-201ENST00000436045 768 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.35□□□□□ -1.55
HNF4AP41235 AL606490.8-201ENST00000441624 319 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.35□□□□□ -1.55
HNF4AP41235 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.35□□□□□ -1.55
HNF4AP41235 CLIC4P1-201ENST00000453177 535 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.35□□□□□ -1.55
HNF4AP41235 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.35□□□□□ -1.55
HNF4AP41235 RNU6-491P-201ENST00000516099 110 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 AL049872.1-201ENST00000556323 322 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 MRPS21P7-201ENST00000566937 238 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.35□□□□□ -1.55
HNF4AP41235 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.35□□□□□ -1.55
HNF4AP41235 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.35□□□□□ -1.55
HNF4AP41235 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.35□□□□□ -1.55
HNF4AP41235 TMEM30CP-203ENST00000637814 1035 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
HNF4AP41235 AL359715.3-201ENST00000569267 2123 ntBASIC5.35□□□□□ -1.55
HNF4AP41235 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
HNF4AP41235 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.34□□□□□ -1.55
HNF4AP41235 SNORA70.6-201ENST00000383934 134 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HNF4AP41235 AMZ2P2-201ENST00000406819 1057 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 RN7SKP222-201ENST00000410651 315 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 RPSAP35-201ENST00000413753 818 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 OR6E1P-201ENST00000414424 923 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AL512504.1-201ENST00000415494 778 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 AL590609.2-201ENST00000421430 368 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 RPL12P11-201ENST00000439970 501 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 Z99127.2-201ENST00000441426 334 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 RSL24D1P2-201ENST00000445584 366 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.34□□□□□ -1.55
HNF4AP41235 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 GAPDHP14-201ENST00000450472 937 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 PSMC1P13-201ENST00000458195 985 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HNF4AP41235 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 AC020779.1-201ENST00000478757 796 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 RPSAP51-201ENST00000497462 645 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AC021106.1-201ENST00000509020 1058 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 RFPL4AP5-201ENST00000514977 504 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 AC079064.1-201ENST00000528365 362 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AC107918.3-201ENST00000533272 382 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AC027544.3-201ENST00000535082 757 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.34□□□□□ -1.55
HNF4AP41235 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.34□□□□□ -1.55
HNF4AP41235 MIR4505-201ENST00000582238 73 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 MIR4660-201ENST00000583549 74 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.34□□□□□ -1.55
HNF4AP41235 AP003400.6-201ENST00000624698 740 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 AC103703.1-201ENST00000634783 663 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 OR13C1P-202ENST00000641378 2919 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 AL450326.2-201ENST00000421913 1962 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
HNF4AP41235 AC009313.2-201ENST00000417893 1941 ntBASIC5.34□□□□□ -1.55
HNF4AP41235 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HNF4AP41235 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HNF4AP41235 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HNF4AP41235 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.34□□□□□ -1.56
HNF4AP41235 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HNF4AP41235 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
HNF4AP41235 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HNF4AP41235 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 BTBD10P1-201ENST00000549824 1352 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HNF4AP41235 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HNF4AP41235 RNA5SP46-201ENST00000362370 120 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 SNORD56.6-201ENST00000384569 71 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 AC093719.1-202ENST00000392735 373 ntBASIC5.33□□□□□ -1.56
HNF4AP41235 RPL26P37-201ENST00000411983 438 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms