Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 TOMM20P2-201ENST00000540082 421 ntBASIC6.48□□□□□ -1.37
RFC4P35249 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 AC084824.2-201ENST00000548906 345 ntBASIC6.48□□□□□ -1.37
RFC4P35249 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.48□□□□□ -1.37
RFC4P35249 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 AL512782.1-201ENST00000603093 364 ntBASIC6.48□□□□□ -1.37
RFC4P35249 AC241377.1-201ENST00000619797 406 ntBASIC6.48□□□□□ -1.37
RFC4P35249 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RFC4P35249 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
RFC4P35249 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
RFC4P35249 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
RFC4P35249 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.47□□□□□ -1.37
RFC4P35249 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RFC4P35249 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC4P35249 AL137058.3-201ENST00000624531 3099 ntBASIC6.47□□□□□ -1.37
RFC4P35249 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RFC4P35249 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 AC092681.1-201ENST00000297369 291 ntBASIC6.47□□□□□ -1.37
RFC4P35249 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
RFC4P35249 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.47□□□□□ -1.37
RFC4P35249 SNORA70.2-201ENST00000364506 135 ntBASIC6.47□□□□□ -1.37
RFC4P35249 AC068538.1-201ENST00000376856 336 ntBASIC6.47□□□□□ -1.37
RFC4P35249 SNORA70.9-201ENST00000384370 135 ntBASIC6.47□□□□□ -1.37
RFC4P35249 RNA5SP332-201ENST00000391063 115 ntBASIC6.47□□□□□ -1.37
RFC4P35249 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
RFC4P35249 AL021331.1-201ENST00000402817 582 ntBASIC6.47□□□□□ -1.37
RFC4P35249 AC004074.1-201ENST00000421810 1063 ntBASIC6.47□□□□□ -1.37
RFC4P35249 RPL18P10-201ENST00000425606 538 ntBASIC6.47□□□□□ -1.37
RFC4P35249 OR7E125P-201ENST00000443450 846 ntBASIC6.47□□□□□ -1.37
RFC4P35249 AC011005.3-201ENST00000491624 395 ntBASIC6.47□□□□□ -1.37
RFC4P35249 AC010350.1-201ENST00000504908 231 ntBASIC6.47□□□□□ -1.37
RFC4P35249 GLUD1P3-202ENST00000508551 200 ntBASIC6.47□□□□□ -1.37
RFC4P35249 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.47□□□□□ -1.37
RFC4P35249 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
RFC4P35249 AC091932.2-201ENST00000623014 291 ntBASIC6.47□□□□□ -1.37
RFC4P35249 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
RFC4P35249 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 SAMMSON-226ENST00000642089 1582 ntBASIC6.47□□□□□ -1.37
RFC4P35249 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 AC079298.1-201ENST00000625026 1619 ntBASIC6.47□□□□□ -1.37
RFC4P35249 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.47□□□□□ -1.37
RFC4P35249 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
RFC4P35249 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.46□□□□□ -1.37
RFC4P35249 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFC4P35249 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFC4P35249 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFC4P35249 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
RFC4P35249 AC100757.1-201ENST00000616872 1835 ntBASIC6.46□□□□□ -1.37
RFC4P35249 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.46□□□□□ -1.38
RFC4P35249 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
RFC4P35249 RPL7P58-201ENST00000402913 758 ntBASIC6.46□□□□□ -1.38
RFC4P35249 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 RN7SL189P-201ENST00000468631 289 ntBASIC6.46□□□□□ -1.38
RFC4P35249 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.46□□□□□ -1.38
RFC4P35249 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 RNU6-964P-201ENST00000516524 69 ntBASIC6.46□□□□□ -1.38
RFC4P35249 OR4A43P-201ENST00000532938 908 ntBASIC6.46□□□□□ -1.38
RFC4P35249 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.46□□□□□ -1.38
RFC4P35249 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 AC074050.1-201ENST00000563247 211 ntBASIC6.46□□□□□ -1.38
RFC4P35249 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 AL583832.1-201ENST00000603227 784 ntBASIC6.46□□□□□ -1.38
RFC4P35249 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 AC140479.2-201ENST00000421567 3130 ntBASIC6.46□□□□□ -1.38
RFC4P35249 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
RFC4P35249 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
RFC4P35249 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC4P35249 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC4P35249 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFC4P35249 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFC4P35249 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
RFC4P35249 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RFC4P35249 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.45□□□□□ -1.38
RFC4P35249 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.45□□□□□ -1.38
RFC4P35249 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RFC4P35249 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.45□□□□□ -1.38
RFC4P35249 RNU1-74P-201ENST00000384108 171 ntBASIC6.45□□□□□ -1.38
RFC4P35249 HMGB3P7-201ENST00000400214 611 ntBASIC6.45□□□□□ -1.38
RFC4P35249 MIR298-201ENST00000401212 88 ntBASIC6.45□□□□□ -1.38
RFC4P35249 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 179.7 ms