Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM4SF1P30408 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.4□□□□□ -1.38
TM4SF1P30408 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TM4SF1P30408 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 RNU6-891P-201ENST00000384280 111 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.4□□□□□ -1.38
TM4SF1P30408 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
TM4SF1P30408 AC004690.1-201ENST00000418216 328 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TM4SF1P30408 AC009480.2-201ENST00000422916 432 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.4□□□□□ -1.38
TM4SF1P30408 AC124944.2-201ENST00000429866 1242 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.4□□□□□ -1.38
TM4SF1P30408 AL161722.2-201ENST00000434731 981 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 IGHV5-78-201ENST00000450948 295 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TM4SF1P30408 OR4A17P-201ENST00000526032 904 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
TM4SF1P30408 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC6.4□□□□□ -1.38
TM4SF1P30408 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.4□□□□□ -1.38
TM4SF1P30408 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.4□□□□□ -1.38
TM4SF1P30408 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC6.4□□□□□ -1.38
TM4SF1P30408 AL139124.1-201ENST00000609123 421 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 AC117490.2-201ENST00000610042 594 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.4□□□□□ -1.38
TM4SF1P30408 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.4□□□□□ -1.38
TM4SF1P30408 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TM4SF1P30408 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.4□□□□□ -1.39
TM4SF1P30408 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TM4SF1P30408 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.4□□□□□ -1.39
TM4SF1P30408 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TM4SF1P30408 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TM4SF1P30408 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TM4SF1P30408 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
TM4SF1P30408 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.4□□□□□ -1.39
TM4SF1P30408 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 AL132640.2-201ENST00000559968 1698 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TM4SF1P30408 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TM4SF1P30408 RPS3AP23-201ENST00000401762 784 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 AC098592.2-201ENST00000413158 265 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.39□□□□□ -1.39
TM4SF1P30408 AL590399.2-201ENST00000427536 309 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 AC234781.3-201ENST00000452540 973 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC6.39□□□□□ -1.39
TM4SF1P30408 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.39□□□□□ -1.39
TM4SF1P30408 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.39□□□□□ -1.39
TM4SF1P30408 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.39□□□□□ -1.39
TM4SF1P30408 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.39□□□□□ -1.39
TM4SF1P30408 IGKV2D-10-201ENST00000520194 281 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.39□□□□□ -1.39
TM4SF1P30408 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.39□□□□□ -1.39
TM4SF1P30408 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.39□□□□□ -1.39
TM4SF1P30408 PARP1P2-201ENST00000556806 195 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.39□□□□□ -1.39
TM4SF1P30408 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
TM4SF1P30408 AL512782.1-201ENST00000603093 364 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 AC011453.2-201ENST00000603737 729 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.39□□□□□ -1.39
TM4SF1P30408 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC6.39□□□□□ -1.39
TM4SF1P30408 SAMMSON-226ENST00000642089 1582 ntBASIC6.39□□□□□ -1.39
TM4SF1P30408 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TM4SF1P30408 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.38□□□□□ -1.39
TM4SF1P30408 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.38□□□□□ -1.39
TM4SF1P30408 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.38□□□□□ -1.39
TM4SF1P30408 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
TM4SF1P30408 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
TM4SF1P30408 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC6.38□□□□□ -1.39
TM4SF1P30408 SNORA70.9-201ENST00000384370 135 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
TM4SF1P30408 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.38□□□□□ -1.39
TM4SF1P30408 AF186996.5-201ENST00000418098 904 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.38□□□□□ -1.39
TM4SF1P30408 AL354714.3-201ENST00000447284 493 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.38□□□□□ -1.39
TM4SF1P30408 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.38□□□□□ -1.39
TM4SF1P30408 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.38□□□□□ -1.39
TM4SF1P30408 ASB8-204ENST00000536071 568 ntTSL 4 BASIC6.38□□□□□ -1.39
TM4SF1P30408 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
TM4SF1P30408 AC084824.2-201ENST00000548906 345 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.38□□□□□ -1.39
TM4SF1P30408 AC074050.1-201ENST00000563247 211 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.38□□□□□ -1.39
TM4SF1P30408 RN7SL690P-201ENST00000582087 240 ntBASIC6.38□□□□□ -1.39
TM4SF1P30408 AC020915.5-201ENST00000596836 964 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms