Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL8A2P25067 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
COL8A2P25067 RNU1-74P-201ENST00000384108 171 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 SNORA51.8-201ENST00000384234 132 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 MIR589-201ENST00000385238 99 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 RN7SKP114-201ENST00000410327 279 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.34□□□□□ -1.71
COL8A2P25067 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.34□□□□□ -1.71
COL8A2P25067 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.34□□□□□ -1.71
COL8A2P25067 SUMO2P1-206ENST00000445436 284 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 RPL35AP28-201ENST00000459730 331 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AP000797.2-201ENST00000475768 606 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.34□□□□□ -1.71
COL8A2P25067 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.34□□□□□ -1.71
COL8A2P25067 AC105420.1-201ENST00000504389 582 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.34□□□□□ -1.71
COL8A2P25067 OR5AZ1P-201ENST00000527448 943 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AP000676.2-201ENST00000529711 301 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 AC005000.1-201ENST00000536192 288 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.34□□□□□ -1.71
COL8A2P25067 Mico1.1-201ENST00000611698 204 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AL162574.1-201ENST00000615702 950 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.34□□□□□ -1.71
COL8A2P25067 AL445528.2-201ENST00000620582 470 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AL353684.1-201ENST00000622677 1120 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AL353662.3-201ENST00000625131 237 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.34□□□□□ -1.71
COL8A2P25067 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 TCP11X1-202ENST00000622971 1372 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC4.34□□□□□ -1.71
COL8A2P25067 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL8A2P25067 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL8A2P25067 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
COL8A2P25067 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
COL8A2P25067 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL8A2P25067 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL8A2P25067 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.34□□□□□ -1.72
COL8A2P25067 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.34□□□□□ -1.72
COL8A2P25067 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
COL8A2P25067 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL8A2P25067 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.33□□□□□ -1.72
COL8A2P25067 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.33□□□□□ -1.72
COL8A2P25067 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
COL8A2P25067 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.33□□□□□ -1.72
COL8A2P25067 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.33□□□□□ -1.72
COL8A2P25067 NXF4-202ENST00000416098 1465 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL8A2P25067 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC4.33□□□□□ -1.72
COL8A2P25067 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL8A2P25067 AC103591.2-201ENST00000265259 766 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.33□□□□□ -1.72
COL8A2P25067 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.33□□□□□ -1.72
COL8A2P25067 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.33□□□□□ -1.72
COL8A2P25067 AC020779.1-201ENST00000478757 796 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 RPS12P31-201ENST00000491419 398 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 RN7SKP260-201ENST00000516907 149 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.33□□□□□ -1.72
COL8A2P25067 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.33□□□□□ -1.72
COL8A2P25067 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
COL8A2P25067 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.33□□□□□ -1.72
COL8A2P25067 AC027216.1-201ENST00000577726 685 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
COL8A2P25067 AC011840.5-201ENST00000582125 771 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.33□□□□□ -1.72
COL8A2P25067 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.33□□□□□ -1.72
COL8A2P25067 OR51C1P-201ENST00000608504 942 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 AP005131.7-201ENST00000610087 611 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 AC026367.3-201ENST00000619032 590 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 AC091905.4-201ENST00000623432 202 ntBASIC4.33□□□□□ -1.72
COL8A2P25067 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL8A2P25067 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.33□□□□□ -1.72
COL8A2P25067 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
COL8A2P25067 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
COL8A2P25067 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.32□□□□□ -1.72
COL8A2P25067 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.32□□□□□ -1.72
COL8A2P25067 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
COL8A2P25067 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
COL8A2P25067 RN7SKP104-201ENST00000362605 328 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 RN7SKP103-201ENST00000363848 320 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AL133270.1-201ENST00000402635 279 ntBASIC4.32□□□□□ -1.72
COL8A2P25067 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.32□□□□□ -1.72
COL8A2P25067 RBMY2KP-201ENST00000418221 992 ntBASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms