Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC010245.2-201ENST00000606908 1167 ntBASIC5.36□□□□□ -1.55
CDH3P22223 AC007204.2-201ENST00000615022 616 ntBASIC5.36□□□□□ -1.55
CDH3P22223 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.36□□□□□ -1.55
CDH3P22223 AC006213.5-201ENST00000619673 288 ntBASIC5.36□□□□□ -1.55
CDH3P22223 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH3P22223 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH3P22223 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH3P22223 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
CDH3P22223 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 SMG1P4-204ENST00000523028 4131 ntBASIC5.35□□□□□ -1.55
CDH3P22223 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 AL121886.1-201ENST00000358609 435 ntBASIC5.35□□□□□ -1.55
CDH3P22223 RN7SKP162-201ENST00000363605 345 ntBASIC5.35□□□□□ -1.55
CDH3P22223 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CDH3P22223 AC005042.1-201ENST00000393397 800 ntBASIC5.35□□□□□ -1.55
CDH3P22223 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 RCC2P2-201ENST00000422174 918 ntBASIC5.35□□□□□ -1.55
CDH3P22223 NPM1P22-201ENST00000427761 952 ntBASIC5.35□□□□□ -1.55
CDH3P22223 NDUFA5P1-201ENST00000433858 341 ntBASIC5.35□□□□□ -1.55
CDH3P22223 HMGB3P10-201ENST00000434734 572 ntBASIC5.35□□□□□ -1.55
CDH3P22223 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 NANOGP9-201ENST00000439890 892 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 AC012512.1-201ENST00000446594 718 ntBASIC5.35□□□□□ -1.55
CDH3P22223 RPS23P9-201ENST00000448848 438 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 RN7SL583P-201ENST00000475692 287 ntBASIC5.35□□□□□ -1.55
CDH3P22223 OR2AO1P-201ENST00000476497 403 ntBASIC5.35□□□□□ -1.55
CDH3P22223 RN7SL214P-201ENST00000487317 265 ntBASIC5.35□□□□□ -1.55
CDH3P22223 EIF1P7-201ENST00000487533 337 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 SNORA70.17-201ENST00000516449 133 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 AP003168.1-201ENST00000530091 307 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC137627.1-201ENST00000545761 289 ntBASIC5.35□□□□□ -1.55
CDH3P22223 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH3P22223 H3F3BP2-201ENST00000583907 357 ntBASIC5.35□□□□□ -1.55
CDH3P22223 FAM60CP-201ENST00000591086 664 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.35□□□□□ -1.55
CDH3P22223 AL118522.2-201ENST00000616045 615 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC021766.1-201ENST00000624404 741 ntBASIC5.35□□□□□ -1.55
CDH3P22223 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.35□□□□□ -1.55
CDH3P22223 SAMMSON-227ENST00000642114 1199 ntBASIC5.35□□□□□ -1.55
CDH3P22223 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 LINC01963-201ENST00000562038 3148 ntBASIC5.35□□□□□ -1.55
CDH3P22223 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH3P22223 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH3P22223 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.34□□□□□ -1.55
CDH3P22223 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH3P22223 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.34□□□□□ -1.55
CDH3P22223 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 BTBD10P1-201ENST00000549824 1352 ntBASIC5.34□□□□□ -1.55
CDH3P22223 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 RNU6-386P-201ENST00000362650 107 ntBASIC5.34□□□□□ -1.55
CDH3P22223 RNA5SP326-201ENST00000363209 110 ntBASIC5.34□□□□□ -1.55
CDH3P22223 RNA5SP234-201ENST00000363916 119 ntBASIC5.34□□□□□ -1.55
CDH3P22223 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDH3P22223 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CDH3P22223 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CDH3P22223 HMGB3P7-201ENST00000400214 611 ntBASIC5.34□□□□□ -1.55
CDH3P22223 SEPT7P8-201ENST00000413308 775 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC019070.1-201ENST00000415008 1024 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC007064.3-201ENST00000422608 359 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH3P22223 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.34□□□□□ -1.55
CDH3P22223 AL138787.1-202ENST00000437804 898 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.34□□□□□ -1.55
CDH3P22223 AC114878.1-201ENST00000441166 358 ntBASIC5.34□□□□□ -1.55
CDH3P22223 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.34□□□□□ -1.55
CDH3P22223 AL500527.1-201ENST00000448532 255 ntBASIC5.34□□□□□ -1.55
CDH3P22223 TPT1P1-201ENST00000458495 518 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms