Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.67□□□□□ -1.5
COL11A1P12107 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.67□□□□□ -1.5
COL11A1P12107 SNORA73.1-201ENST00000363107 205 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AC068538.1-201ENST00000376856 336 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 SNORA70.10-201ENST00000384515 134 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.67□□□□□ -1.5
COL11A1P12107 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.67□□□□□ -1.5
COL11A1P12107 TXNP2-201ENST00000443918 295 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 OR2A3P-201ENST00000493774 953 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AC025674.1-201ENST00000507074 324 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 AC022884.2-201ENST00000578535 580 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.67□□□□□ -1.5
COL11A1P12107 PRPF19P1-201ENST00000584766 898 ntBASIC5.67□□□□□ -1.5
COL11A1P12107 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.67□□□□□ -1.5
COL11A1P12107 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.67□□□□□ -1.5
COL11A1P12107 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
COL11A1P12107 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL11A1P12107 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.66□□□□□ -1.5
COL11A1P12107 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL11A1P12107 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.66□□□□□ -1.5
COL11A1P12107 AC068446.1-201ENST00000556425 1549 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL11A1P12107 GPS2P1-201ENST00000411761 986 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 P2RY10P2-201ENST00000416730 913 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 AC021876.1-201ENST00000425959 359 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 C4BPAP2-201ENST00000428434 478 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.66□□□□□ -1.5
COL11A1P12107 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.66□□□□□ -1.5
COL11A1P12107 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC5.66□□□□□ -1.5
COL11A1P12107 AC087360.1-201ENST00000518788 616 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.66□□□□□ -1.5
COL11A1P12107 IGKV1-32-201ENST00000519290 311 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 SCARNA9-201ENST00000530422 353 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 AC116553.2-201ENST00000564203 463 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 MIR4277-201ENST00000578298 84 ntBASIC5.66□□□□□ -1.5
COL11A1P12107 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.66□□□□□ -1.5
COL11A1P12107 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL11A1P12107 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL11A1P12107 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL11A1P12107 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.65□□□□□ -1.5
COL11A1P12107 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL11A1P12107 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL11A1P12107 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
COL11A1P12107 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL11A1P12107 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.65□□□□□ -1.5
COL11A1P12107 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL11A1P12107 AC119751.6-201ENST00000416712 186 ntBASIC5.65□□□□□ -1.5
COL11A1P12107 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.65□□□□□ -1.5
COL11A1P12107 AL645608.4-201ENST00000423619 154 ntBASIC5.65□□□□□ -1.5
COL11A1P12107 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.65□□□□□ -1.5
COL11A1P12107 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.65□□□□□ -1.5
COL11A1P12107 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.65□□□□□ -1.5
COL11A1P12107 RNU2-30P-201ENST00000516209 141 ntBASIC5.65□□□□□ -1.5
COL11A1P12107 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.65□□□□□ -1.5
COL11A1P12107 AC008147.3-201ENST00000548666 354 ntBASIC5.65□□□□□ -1.5
COL11A1P12107 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL11A1P12107 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.65□□□□□ -1.5
COL11A1P12107 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
COL11A1P12107 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.65□□□□□ -1.5
COL11A1P12107 AL161616.1-201ENST00000611867 286 ntBASIC5.65□□□□□ -1.5
COL11A1P12107 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL11A1P12107 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
COL11A1P12107 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
COL11A1P12107 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.65□□□□□ -1.51
COL11A1P12107 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL11A1P12107 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL11A1P12107 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL11A1P12107 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL11A1P12107 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.51
COL11A1P12107 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.65□□□□□ -1.51
COL11A1P12107 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
COL11A1P12107 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
COL11A1P12107 AC007618.1-201ENST00000366455 732 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
COL11A1P12107 RNU2-50P-201ENST00000410494 143 ntBASIC5.64□□□□□ -1.51
COL11A1P12107 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.64□□□□□ -1.51
COL11A1P12107 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC5.64□□□□□ -1.51
COL11A1P12107 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms