Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.69□□□□□ -1.5
CLTAP09496 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.69□□□□□ -1.5
CLTAP09496 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.69□□□□□ -1.5
CLTAP09496 AC026367.3-201ENST00000619032 590 ntBASIC5.69□□□□□ -1.5
CLTAP09496 AC018445.2-201ENST00000622987 260 ntBASIC5.69□□□□□ -1.5
CLTAP09496 AC099494.2-201ENST00000623371 978 ntBASIC5.69□□□□□ -1.5
CLTAP09496 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.69□□□□□ -1.5
CLTAP09496 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.69□□□□□ -1.5
CLTAP09496 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.69□□□□□ -1.5
CLTAP09496 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CLTAP09496 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 AC023421.1-201ENST00000590535 1785 ntBASIC5.68□□□□□ -1.5
CLTAP09496 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 MIR765-201ENST00000390226 114 ntBASIC5.68□□□□□ -1.5
CLTAP09496 SNORA48.4-201ENST00000391089 134 ntBASIC5.68□□□□□ -1.5
CLTAP09496 MIR1182-201ENST00000408363 97 ntBASIC5.68□□□□□ -1.5
CLTAP09496 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.68□□□□□ -1.5
CLTAP09496 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLTAP09496 AL445213.1-201ENST00000412589 747 ntBASIC5.68□□□□□ -1.5
CLTAP09496 AC090018.1-201ENST00000434369 367 ntBASIC5.68□□□□□ -1.5
CLTAP09496 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.68□□□□□ -1.5
CLTAP09496 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 RNU6-513P-201ENST00000516104 104 ntBASIC5.68□□□□□ -1.5
CLTAP09496 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.68□□□□□ -1.5
CLTAP09496 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.68□□□□□ -1.5
CLTAP09496 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.68□□□□□ -1.5
CLTAP09496 AP005131.7-201ENST00000610087 611 ntBASIC5.68□□□□□ -1.5
CLTAP09496 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
CLTAP09496 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLTAP09496 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CLTAP09496 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.68□□□□□ -1.5
CLTAP09496 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CLTAP09496 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CLTAP09496 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.68□□□□□ -1.5
CLTAP09496 Z95331.1-201ENST00000623075 23112 ntBASIC5.68□□□□□ -1.5
CLTAP09496 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 AC104260.2-201ENST00000623551 3497 ntBASIC5.67□□□□□ -1.5
CLTAP09496 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
CLTAP09496 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 TCP1P3-201ENST00000414406 1498 ntBASIC5.67□□□□□ -1.5
CLTAP09496 OR1L6-202ENST00000373684 1044 ntBASIC5.67□□□□□ -1.5
CLTAP09496 MIR589-201ENST00000385238 99 ntBASIC5.67□□□□□ -1.5
CLTAP09496 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.67□□□□□ -1.5
CLTAP09496 AC211486.3-201ENST00000412694 621 ntBASIC5.67□□□□□ -1.5
CLTAP09496 RPL23AP27-201ENST00000415161 451 ntBASIC5.67□□□□□ -1.5
CLTAP09496 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.67□□□□□ -1.5
CLTAP09496 RN7SL189P-201ENST00000468631 289 ntBASIC5.67□□□□□ -1.5
CLTAP09496 RN7SL814P-201ENST00000487715 300 ntBASIC5.67□□□□□ -1.5
CLTAP09496 USP9YP2-201ENST00000504503 1000 ntBASIC5.67□□□□□ -1.5
CLTAP09496 ENPP7P11-201ENST00000505915 627 ntBASIC5.67□□□□□ -1.5
CLTAP09496 USP9YP1-201ENST00000513521 1002 ntBASIC5.67□□□□□ -1.5
CLTAP09496 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 AC011447.4-201ENST00000587562 111 ntBASIC5.67□□□□□ -1.5
CLTAP09496 AC006116.3-201ENST00000592968 361 ntBASIC5.67□□□□□ -1.5
CLTAP09496 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.67□□□□□ -1.5
CLTAP09496 AC011626.1-201ENST00000604710 562 ntBASIC5.67□□□□□ -1.5
CLTAP09496 TAS2R6P-201ENST00000605022 826 ntBASIC5.67□□□□□ -1.5
CLTAP09496 AC211433.2-201ENST00000608433 387 ntBASIC5.67□□□□□ -1.5
CLTAP09496 MIR6839-201ENST00000620425 113 ntBASIC5.67□□□□□ -1.5
CLTAP09496 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CLTAP09496 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CLTAP09496 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.67□□□□□ -1.5
CLTAP09496 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CLTAP09496 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTAP09496 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTAP09496 AC133552.1-201ENST00000569988 4007 ntBASIC5.66□□□□□ -1.5
CLTAP09496 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.66□□□□□ -1.5
CLTAP09496 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.66□□□□□ -1.5
CLTAP09496 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CLTAP09496 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CLTAP09496 RNA5SP507-201ENST00000363603 121 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms