Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
TNFP01375 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 RN7SKP149-201ENST00000363008 344 ntBASIC4.99□□□□□ -1.61
TNFP01375 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 SETP9-201ENST00000423837 832 ntBASIC4.99□□□□□ -1.61
TNFP01375 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.99□□□□□ -1.61
TNFP01375 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.99□□□□□ -1.61
TNFP01375 RHOT1P3-201ENST00000436571 331 ntBASIC4.99□□□□□ -1.61
TNFP01375 OR7E125P-201ENST00000443450 846 ntBASIC4.99□□□□□ -1.61
TNFP01375 AL137845.2-201ENST00000444292 988 ntBASIC4.99□□□□□ -1.61
TNFP01375 AC112498.1-201ENST00000444401 332 ntBASIC4.99□□□□□ -1.61
TNFP01375 AC108751.3-201ENST00000461814 1020 ntBASIC4.99□□□□□ -1.61
TNFP01375 IMPA1P1-201ENST00000510718 842 ntBASIC4.99□□□□□ -1.61
TNFP01375 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.99□□□□□ -1.61
TNFP01375 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.99□□□□□ -1.61
TNFP01375 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 AC125494.2-201ENST00000602431 657 ntBASIC4.99□□□□□ -1.61
TNFP01375 AC018690.1-201ENST00000608144 626 ntBASIC4.99□□□□□ -1.61
TNFP01375 FAM25E-202ENST00000608562 189 ntBASIC4.99□□□□□ -1.61
TNFP01375 AC091953.3-201ENST00000623220 236 ntBASIC4.99□□□□□ -1.61
TNFP01375 AC073342.3-201ENST00000624211 193 ntBASIC4.99□□□□□ -1.61
TNFP01375 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
TNFP01375 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
TNFP01375 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.99□□□□□ -1.61
TNFP01375 AC093671.1-201ENST00000624981 2929 ntBASIC4.99□□□□□ -1.61
TNFP01375 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
TNFP01375 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.98□□□□□ -1.61
TNFP01375 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
TNFP01375 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFP01375 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.98□□□□□ -1.61
TNFP01375 SNORA2.3-201ENST00000383920 135 ntBASIC4.98□□□□□ -1.61
TNFP01375 RNA5SP241-201ENST00000391326 114 ntBASIC4.98□□□□□ -1.61
TNFP01375 NPM1P37-201ENST00000403105 874 ntBASIC4.98□□□□□ -1.61
TNFP01375 AL390316.1-201ENST00000406279 553 ntBASIC4.98□□□□□ -1.61
TNFP01375 OR2AM1P-201ENST00000422137 422 ntBASIC4.98□□□□□ -1.61
TNFP01375 BX276092.6-201ENST00000430476 250 ntBASIC4.98□□□□□ -1.61
TNFP01375 AL049745.1-201ENST00000433953 286 ntBASIC4.98□□□□□ -1.61
TNFP01375 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFP01375 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFP01375 BX276092.8-201ENST00000455722 250 ntBASIC4.98□□□□□ -1.61
TNFP01375 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFP01375 AC091180.1-201ENST00000462104 372 ntBASIC4.98□□□□□ -1.61
TNFP01375 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TNFP01375 RNA5SP43-201ENST00000516559 110 ntBASIC4.98□□□□□ -1.61
TNFP01375 AC092709.1-201ENST00000521355 1045 ntBASIC4.98□□□□□ -1.61
TNFP01375 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFP01375 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.98□□□□□ -1.61
TNFP01375 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.98□□□□□ -1.61
TNFP01375 MEMO1P5-201ENST00000604810 406 ntBASIC4.98□□□□□ -1.61
TNFP01375 AC087783.2-201ENST00000605070 562 ntBASIC4.98□□□□□ -1.61
TNFP01375 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 AL162574.1-201ENST00000615702 950 ntBASIC4.98□□□□□ -1.61
TNFP01375 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
TNFP01375 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.98□□□□□ -1.61
TNFP01375 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFP01375 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC4.98□□□□□ -1.61
TNFP01375 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TNFP01375 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 Z95331.1-201ENST00000623075 23112 ntBASIC4.97□□□□□ -1.61
TNFP01375 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 IRF5P1-201ENST00000504852 2164 ntBASIC4.97□□□□□ -1.61
TNFP01375 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.97□□□□□ -1.61
TNFP01375 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.97□□□□□ -1.61
TNFP01375 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.97□□□□□ -1.61
TNFP01375 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TNFP01375 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TNFP01375 GAPDHP15-201ENST00000398586 975 ntBASIC4.97□□□□□ -1.61
TNFP01375 AL021331.1-201ENST00000402817 582 ntBASIC4.97□□□□□ -1.61
TNFP01375 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.97□□□□□ -1.61
TNFP01375 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms