Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.8□□□□□ -1.8
COLCA2A8K830 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA2A8K830 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
COLCA2A8K830 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC027287.1-201ENST00000553115 1453 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
COLCA2A8K830 RNA5SP485-201ENST00000365053 119 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 SNORA30B-201ENST00000365319 129 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COLCA2A8K830 TRAV35-201ENST00000390462 330 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 PRELID1P1-201ENST00000403549 660 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AL080315.1-201ENST00000406055 466 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 SNORA11D-201ENST00000408548 128 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 SNORA11E-201ENST00000408778 128 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 VN1R3-201ENST00000418822 919 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 PTPN2P1-201ENST00000423212 1072 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 Z74021.1-201ENST00000423610 407 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 ELOCP18-201ENST00000434209 337 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AL450023.3-201ENST00000440592 271 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AL162388.1-201ENST00000450912 352 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AL691482.1-201ENST00000453255 87 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 RN7SL799P-201ENST00000475891 298 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 RPL12P30-201ENST00000488389 499 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC3.79□□□□□ -1.8
COLCA2A8K830 RPL7L1P7-201ENST00000509986 724 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 OSTC-204ENST00000512478 663 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC015795.1-201ENST00000513669 327 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 IGHV3-63-201ENST00000518422 341 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC090151.1-201ENST00000520784 730 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 IFITM8P-201ENST00000522529 394 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 MINCR-206ENST00000524335 499 ntTSL 2 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AP006289.1-201ENST00000538089 277 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 RN7SL426P-201ENST00000579106 295 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 MIR3689C-201ENST00000581239 72 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC3.79□□□□□ -1.8
COLCA2A8K830 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC3.79□□□□□ -1.8
COLCA2A8K830 CDC42EP3P1-201ENST00000601004 764 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC005252.1-201ENST00000604518 1063 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 HMGB1P50-201ENST00000605814 607 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC133485.6-201ENST00000624045 688 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
COLCA2A8K830 OR8G3P-202ENST00000641572 1255 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.79□□□□□ -1.8
COLCA2A8K830 OR5AQ1P-202ENST00000641257 1534 ntBASIC3.79□□□□□ -1.8
COLCA2A8K830 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
COLCA2A8K830 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
COLCA2A8K830 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COLCA2A8K830 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COLCA2A8K830 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.78□□□□□ -1.8
COLCA2A8K830 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COLCA2A8K830 AC233968.1-201ENST00000611212 1300 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COLCA2A8K830 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
COLCA2A8K830 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COLCA2A8K830 SNORA64.1-201ENST00000362600 132 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 RNU1-43P-201ENST00000365052 165 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 RN7SKP1-201ENST00000365525 307 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 S100A7-201ENST00000368722 442 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
COLCA2A8K830 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
COLCA2A8K830 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COLCA2A8K830 PCNAP3-201ENST00000397222 778 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 ZNF603P-201ENST00000405613 487 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 AL353133.1-201ENST00000407695 401 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 RN7SKP167-201ENST00000411047 285 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC3.78□□□□□ -1.8
COLCA2A8K830 CBX1P3-201ENST00000413296 527 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
COLCA2A8K830 AL360013.1-201ENST00000419031 858 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC3.78□□□□□ -1.8
COLCA2A8K830 RPL7P4-203ENST00000430239 730 ntBASIC3.78□□□□□ -1.8
COLCA2A8K830 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
COLCA2A8K830 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC3.78□□□□□ -1.8
COLCA2A8K830 AC092162.1-201ENST00000432828 434 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms