Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 MTND4LP13-201ENST00000425022 298 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 VTI1BP4-201ENST00000427516 527 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 HSPD1P12-201ENST00000429127 1069 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 FMO7P-201ENST00000436045 768 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL096829.2-201ENST00000446582 742 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 REG1CP-206ENST00000447469 496 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 LRRC37A14P-201ENST00000452297 462 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 CBX1P2-201ENST00000453841 458 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 RN7SL72P-201ENST00000460697 269 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 RN7SL168P-201ENST00000463821 279 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 GTF2IP9-201ENST00000502460 301 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 HAUS1P1-201ENST00000505275 832 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC034244.2-201ENST00000514668 858 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 RNU5A-7P-201ENST00000515979 116 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC022826.1-201ENST00000519383 805 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL121594.4-201ENST00000556211 1196 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 CD24P2-201ENST00000565486 219 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC019322.1-201ENST00000571869 389 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC012616.1-201ENST00000600294 197 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC079880.2-201ENST00000603790 1213 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AL365181.4-201ENST00000609800 547 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 AC092376.2-201ENST00000622621 4116 ntBASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
TCRBV7S3A2A0A539 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 ADAM5-202ENST00000399789 1942 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 MTHFD2P5-201ENST00000320415 844 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 RNA5SP187-201ENST00000384400 119 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 RNU6-584P-201ENST00000410350 95 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AKR1B10P1-201ENST00000425765 942 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC013262.1-201ENST00000426710 252 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 HMGN1P2-201ENST00000445197 310 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AL450996.1-201ENST00000445574 1202 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 MTND6P5-201ENST00000448266 512 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 OR52E3P-201ENST00000452083 936 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC090602.1-201ENST00000469695 252 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC104115.2-201ENST00000523026 687 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AP004607.2-201ENST00000533949 322 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 YWHAZP1-201ENST00000556286 722 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC093524.1-201ENST00000564266 1094 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC079315.1-201ENST00000602952 623 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC093875.1-201ENST00000623688 504 ntBASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TCRBV7S3A2A0A539 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 545.1 ms