Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 AC079298.1-201ENST00000625026 1619 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC009804.1-201ENST00000400949 179 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AL390774.1-201ENST00000411924 246 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AL121878.1-201ENST00000418638 859 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 YY1P1-201ENST00000427625 668 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 CYCSP6-201ENST00000434498 302 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC011225.1-201ENST00000457751 369 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 RN7SL214P-201ENST00000487317 265 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 RN7SL629P-201ENST00000489622 285 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 RPEP1-201ENST00000504507 658 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 CDC42P3-201ENST00000518493 633 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 HMGB1P40-201ENST00000525121 540 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 IMMP1LP3-201ENST00000604197 224 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 CR788268.1-201ENST00000603931 1809 ntBASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4BQ9Y4P1 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 GAPDHP15-201ENST00000398586 975 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AL139039.2-201ENST00000407436 479 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 SNORA79B-201ENST00000410557 148 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 Z68694.1-201ENST00000413929 841 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AL133325.1-201ENST00000421090 382 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 BX510359.3-201ENST00000422168 306 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 RPL7AP49-201ENST00000429522 581 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AL591438.1-201ENST00000433508 581 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC016772.1-201ENST00000444170 1261 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 RAD1P2-201ENST00000446414 663 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC090804.1-201ENST00000448870 490 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 RPS26P41-201ENST00000450370 284 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC093827.1-201ENST00000480094 861 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 RN7SL423P-201ENST00000486202 304 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 RPS4XP14-201ENST00000493072 781 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC092709.1-201ENST00000521355 1045 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 YWHABP2-201ENST00000540201 713 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC126177.5-201ENST00000549599 178 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 NPM1P45-201ENST00000583151 559 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 FKBP1AP1-201ENST00000594588 318 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 SUMO2P15-201ENST00000604285 278 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AL022394.1-201ENST00000606979 292 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 AC138965.3-201ENST00000623875 498 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4BQ9Y4P1 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
ATG4BQ9Y4P1 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms