Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 SNORD35A-201ENST00000363389 86 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 RNU4-91P-201ENST00000364778 135 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-331P-201ENST00000384724 107 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 RPL35AP24-201ENST00000413846 330 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 LINC00993-201ENST00000420453 540 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 OFD1P2Y-201ENST00000421895 1149 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 DUTP4-201ENST00000424782 475 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL035458.1-201ENST00000433096 585 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 TRIM60P18-201ENST00000441518 828 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 SDHCP3-201ENST00000445371 506 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC234771.2-201ENST00000445718 597 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AKR1D1P1-201ENST00000457236 936 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC026254.2-201ENST00000475295 371 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 RN7SL705P-201ENST00000481678 294 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 RN7SL37P-201ENST00000490461 307 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC109462.1-201ENST00000491087 368 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC090543.1-201ENST00000492168 485 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 SUMO2P19-201ENST00000518920 295 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AP001207.1-201ENST00000524051 481 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 NDUFS5P6-201ENST00000529136 295 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC023442.1-201ENST00000531247 422 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC012435.1-202ENST00000568772 240 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AL669831.4-202ENST00000590817 238 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC006116.10-201ENST00000591836 581 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC020765.1-201ENST00000604296 328 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC011891.2-201ENST00000604949 397 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC015849.6-201ENST00000605454 474 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 AC005514.1-201ENST00000623521 208 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 CLCA3P-203ENST00000490028 2781 ntBASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
PDZRN3Q9UPQ7 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 GAGE1-204ENST00000619375 2873 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CACNA1D-211ENST00000636570 6441 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 STAG3L4-201ENST00000352103 530 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-618P-201ENST00000363518 112 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RNU1-24P-201ENST00000364285 165 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RN7SKP226-201ENST00000364912 300 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RNA5SP85-201ENST00000365378 119 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 Y_RNA.419-201ENST00000384041 102 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RNU6-224P-201ENST00000384055 107 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RNU4-74P-201ENST00000411280 161 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 MED14P1-201ENST00000430517 648 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RPSAP32-201ENST00000432681 526 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 LSM3P3-201ENST00000436601 306 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC016908.1-201ENST00000442571 1219 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC233982.1-201ENST00000451247 436 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 CCDC75P1-201ENST00000469247 791 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RPL23AP44-201ENST00000482216 473 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC026826.1-201ENST00000493002 361 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 RNA5SP278-201ENST00000517055 102 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 EEF1B2P2-201ENST00000519625 676 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC090458.1-202ENST00000530387 462 ntTSL 5 BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC027026.1-201ENST00000532323 742 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 PPIAP6-201ENST00000557078 499 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 ACTG1P15-201ENST00000570019 1063 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 AC034268.2-201ENST00000571784 482 ntBASIC8.73□□□□□ -1.01
PDZRN3Q9UPQ7 SNORA70D-201ENST00000578836 135 ntBASIC8.73□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms