Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 AC026790.2-201ENST00000606282 430 ntBASIC5.54□□□□□ -1.52
PCDH9Q9HC56 Z95327.3-201ENST00000610385 572 ntBASIC5.54□□□□□ -1.52
PCDH9Q9HC56 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 MIR6839-201ENST00000620425 113 ntBASIC5.54□□□□□ -1.52
PCDH9Q9HC56 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.54□□□□□ -1.52
PCDH9Q9HC56 TRIM51GP-201ENST00000534741 1350 ntBASIC5.54□□□□□ -1.52
PCDH9Q9HC56 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.54□□□□□ -1.52
PCDH9Q9HC56 AC011755.1-201ENST00000623763 2049 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 RNU6-670P-201ENST00000364312 104 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC007618.1-201ENST00000366455 732 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 UBE2V1P15-201ENST00000407776 448 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AL513325.1-201ENST00000417716 1034 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 RCC2P2-201ENST00000422174 918 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 HMGN2P27-201ENST00000427352 270 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AL391987.1-201ENST00000441025 200 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 RANP1-206ENST00000455094 651 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 RN7SL51P-201ENST00000468230 285 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC090638.1-201ENST00000498296 909 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC008628.1-201ENST00000508663 265 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 RNU6-760P-201ENST00000516078 97 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC012146.2-201ENST00000576545 416 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC040174.2-201ENST00000602701 465 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 OR4H6P-202ENST00000603819 340 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AL589674.2-201ENST00000604304 337 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC009027.1-201ENST00000604510 479 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC105148.1-201ENST00000604961 409 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC010245.2-201ENST00000606908 1167 ntBASIC5.53□□□□□ -1.52
PCDH9Q9HC56 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PCDH9Q9HC56 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 RNA5SP234-201ENST00000363916 119 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AL512422.1-201ENST00000407033 553 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 MTND4LP21-201ENST00000415303 295 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AL357078.2-201ENST00000416486 427 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 MTND2P9-201ENST00000422293 931 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 RPL35AP19-201ENST00000469425 329 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 CBX1P5-201ENST00000475330 559 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 RN7SL174P-201ENST00000475578 289 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 ENPP7P11-201ENST00000505915 627 ntBASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.52□□□□□ -1.53
PCDH9Q9HC56 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms