Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC138832.1-201ENST00000522871 556 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 CYP4F35P-202ENST00000636121 390 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 AC022417.1-201ENST00000624768 1303 ntBASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
UPF3BQ9BZI7 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 RNU1-149P-201ENST00000390870 161 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AL358178.1-201ENST00000407698 397 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 SLC35E1P1-201ENST00000419313 864 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AC079841.1-201ENST00000481228 950 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 RN7SL97P-201ENST00000486780 299 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AC006427.1-201ENST00000514359 712 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AP002884.5-201ENST00000595053 1132 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AC090510.2-201ENST00000617465 629 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AL731566.2-201ENST00000618971 317 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AC005840.5-201ENST00000619166 599 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AP005432.1-201ENST00000580891 3485 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 AC011755.1-201ENST00000623763 2049 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 CYP4Z2P-201ENST00000423332 1512 ntBASIC6.2□□□□□ -1.42
UPF3BQ9BZI7 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC092747.4-201ENST00000620519 1861 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC068870.3-201ENST00000625077 2536 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AL133325.1-201ENST00000421090 382 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 RPSAP50-201ENST00000481955 852 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC024558.1-201ENST00000505008 528 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 FGB-207ENST00000509493 1164 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC008833.1-201ENST00000611633 691 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
UPF3BQ9BZI7 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AL031595.2-201ENST00000624215 19071 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AC026951.1-201ENST00000559530 2459 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 FABP12P1-201ENST00000401911 322 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 RPL35AP24-201ENST00000413846 330 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AC017078.1-201ENST00000416146 368 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 EI24P4-201ENST00000423683 1078 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AL590762.4-201ENST00000425885 253 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 RPL7AP61-201ENST00000443410 636 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 RPL7AP6-201ENST00000477943 801 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 RPL7P6-201ENST00000480903 738 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 OR51K1P-201ENST00000510214 950 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AL049779.2-201ENST00000553847 315 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AC127381.1-201ENST00000555979 939 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 MIR4646-201ENST00000580775 63 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 BNIP3P35-201ENST00000604530 490 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AC010435.1-201ENST00000623353 1177 ntBASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC6.18□□□□□ -1.42
UPF3BQ9BZI7 AC136428.4-201ENST00000634254 1155 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms