Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 AC027544.3-201ENST00000535082 757 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 SUGT1P3-202ENST00000604259 383 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 AP005131.7-201ENST00000610087 611 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 CXADRP3-202ENST00000617265 1100 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 MIR8080-201ENST00000622224 89 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 PROS2P-201ENST00000474651 1951 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 AC068870.3-201ENST00000625077 2536 ntBASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
HDHD3Q9BSH5 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC235565.1-201ENST00000456962 1325 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AL390774.1-201ENST00000411924 246 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AL133325.1-201ENST00000421090 382 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RPL23AP19-201ENST00000436229 369 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RPS11P7-201ENST00000442125 465 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AP000281.1-201ENST00000444036 316 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RN7SL547P-201ENST00000490793 290 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RN7SL447P-201ENST00000494711 245 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC113398.2-201ENST00000507630 558 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 HMGB3P16-201ENST00000508037 287 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC127381.1-201ENST00000555979 939 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AGGF1P9-201ENST00000561884 913 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC010547.7-201ENST00000570323 333 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 AC073869.7-201ENST00000640874 297 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 MTCO1P7-201ENST00000419523 1542 ntBASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HDHD3Q9BSH5 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 MTCO1P22-201ENST00000604619 1360 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 CASC19-221ENST00000641309 1382 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AL672167.1-205ENST00000641112 3080 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 TMSB4XP4-201ENST00000323496 618 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 SNORA2.3-201ENST00000383920 135 ntBASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
HDHD3Q9BSH5 AL121878.1-201ENST00000418638 859 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms