Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 RNU6-618P-201ENST00000363518 112 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 RNA5SP211-201ENST00000365516 117 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 SFR1P1-201ENST00000403720 688 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 RPS3AP2-201ENST00000407190 754 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 MIR1203-201ENST00000408812 85 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 TRGV6-201ENST00000417928 299 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 DPPA2P1-201ENST00000428060 556 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL513321.1-201ENST00000441175 761 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 XKRY2-201ENST00000442362 1093 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL162739.1-201ENST00000450606 307 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 C1DP3-201ENST00000455013 423 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 ATG12P2-201ENST00000456830 416 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 RPS7P7-201ENST00000463499 571 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC011476.1-201ENST00000466725 307 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC008427.1-201ENST00000503102 655 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 GOLGA5P1-201ENST00000507317 980 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 HPRT1P1-201ENST00000509498 657 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 MTCO3P7-201ENST00000510008 774 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC021146.10-201ENST00000515628 706 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 TRIM51DP-201ENST00000529746 596 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 ZNF322P1-201ENST00000568013 1209 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC092121.1-201ENST00000569452 202 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 MIR4433B-201ENST00000581329 102 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 MIR4420-201ENST00000583944 77 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL360219.1-201ENST00000610230 366 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC015540.1-201ENST00000615828 501 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AL445670.1-201ENST00000618889 801 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC068769.1-201ENST00000474767 2426 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 AC005832.2-201ENST00000538921 1430 ntBASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDK5RAP1Q96SZ6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
CDK5RAP1Q96SZ6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDK5RAP1Q96SZ6 PDZK1P1-202ENST00000425209 1350 ntBASIC6.21□□□□□ -1.41
CDK5RAP1Q96SZ6 AC009501.3-201ENST00000605001 1352 ntBASIC6.21□□□□□ -1.41
CDK5RAP1Q96SZ6 AC027279.4-201ENST00000624371 2072 ntBASIC6.21□□□□□ -1.41
CDK5RAP1Q96SZ6 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RNU6-1214P-201ENST00000363650 109 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 Y_RNA.194-201ENST00000363985 102 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL360271.1-201ENST00000395679 510 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RPL5P19-201ENST00000404228 893 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RNU4-27P-201ENST00000410889 139 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 LINC01881-201ENST00000416103 412 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL449283.1-202ENST00000418249 604 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RPS3P2-201ENST00000421346 701 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 PTP4A1P7-201ENST00000423476 514 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 CDY8P-201ENST00000428380 1279 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL731534.1-201ENST00000434711 269 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 NDUFS5P5-201ENST00000437256 321 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 UBE2D3P4-201ENST00000441973 436 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL353572.1-201ENST00000442490 417 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 CUBNP2-201ENST00000443534 1139 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AL929288.2-201ENST00000446368 407 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 CDY20P-201ENST00000447528 1279 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RPS27AP8-201ENST00000452665 445 ntBASIC6.21□□□□□ -1.42
CDK5RAP1Q96SZ6 RPL21P18-201ENST00000469899 480 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms