Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC009027.1-201ENST00000604510 479 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AP003499.2-201ENST00000624100 483 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC019080.5-201ENST00000624891 757 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 OR9K1P-202ENST00000641111 3217 ntBASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM5Q96HC4 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 OR9G4-201ENST00000302957 984 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC005294.1-201ENST00000355509 281 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 RNA5SP319-201ENST00000362768 119 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 RN7SKP153-201ENST00000365026 316 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AL390119.1-201ENST00000440329 312 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AP000281.1-201ENST00000444036 316 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 OR52E3P-201ENST00000452083 936 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC096741.1-201ENST00000472250 846 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 RN7SL273P-201ENST00000481561 299 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 BTG4P1-201ENST00000510421 183 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 snoU109.6-201ENST00000516831 118 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC067904.2-201ENST00000517322 1283 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC112191.2-201ENST00000522428 333 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC074029.2-201ENST00000551045 634 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 BLZF2P-201ENST00000553776 1130 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC092868.3-201ENST00000560515 784 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC005021.1-201ENST00000608730 355 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC000068.2-201ENST00000608816 460 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 WBP1LP8-201ENST00000617401 327 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC026367.3-201ENST00000619032 590 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 MIR6839-201ENST00000620425 113 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AC145207.9-201ENST00000623802 325 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 AL691477.1-201ENST00000624398 162 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 CFTRP2-201ENST00000634304 199 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 CASC19-284ENST00000642142 1868 ntBASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PDLIM5Q96HC4 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL360270.2-201ENST00000562952 5985 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 U3.7-201ENST00000363668 216 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 RN7SKP124-201ENST00000364730 341 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AL031985.1-201ENST00000392713 418 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 RNA5SP487-201ENST00000410186 122 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 COX5BP7-201ENST00000414780 274 ntBASIC5.25□□□□□ -1.57
PDLIM5Q96HC4 AC006065.1-201ENST00000422539 802 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms