Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AC107068.1-201ENST00000563286 4218 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 RNA5SP44-201ENST00000410446 133 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 RPL7P40-201ENST00000481703 745 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC020915.5-201ENST00000596836 964 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC009027.1-201ENST00000604510 479 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 AC109446.4-201ENST00000623235 2755 ntBASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
ALMS1Q8TCU4 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 RPL23AP17-201ENST00000401064 499 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 GPS2P1-201ENST00000411761 986 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 CBX1P1-201ENST00000440184 427 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC010326.1-201ENST00000462726 602 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC092754.1-201ENST00000472975 479 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC097173.1-201ENST00000505862 819 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 NMNAT1P1-201ENST00000554095 876 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 MAP4K4-206ENST00000413150 6958 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 ALB-220ENST00000621628 1606 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 OR9G4-201ENST00000302957 984 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 GAPDHP49-201ENST00000421421 961 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC124944.2-201ENST00000429866 1242 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 RN7SL319P-201ENST00000480656 221 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC105254.2-201ENST00000603636 436 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 OR8B1P-202ENST00000641132 1178 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AL355488.2-201ENST00000609909 2850 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 RNU1-85P-201ENST00000364127 164 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 RNA5SP387-201ENST00000364226 106 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 SNORA66-201ENST00000384792 133 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AL365220.1-201ENST00000432923 399 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 snoU13.22-201ENST00000459428 104 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC104971.1-201ENST00000495117 578 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 CCDC58P3-201ENST00000590792 430 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC022916.3-201ENST00000592961 742 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC008782.1-201ENST00000603386 430 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC003973.3-201ENST00000624863 2822 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AL021331.1-201ENST00000402817 582 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC006065.1-201ENST00000422539 802 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC008958.1-201ENST00000511047 682 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 RNU2-30P-201ENST00000516209 141 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC084824.1-201ENST00000550917 1005 ntBASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.41□□□□□ -1.86
ALMS1Q8TCU4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 AC144833.1-201ENST00000567953 4089 ntBASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
ALMS1Q8TCU4 CNR1-202ENST00000369499 5549 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms