Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC092692.1-201ENST00000623625 2595 ntBASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 MTND4P10-201ENST00000446199 1363 ntBASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SIMC1Q8NDZ2 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 NXF4-202ENST00000416098 1465 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC010266.2-201ENST00000564741 3255 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 MTND5P11-201ENST00000511037 1812 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 Y_RNA.505-201ENST00000384489 102 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 MTND2P18-201ENST00000419962 1030 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC092651.1-201ENST00000426110 312 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC115283.1-201ENST00000427353 400 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 MTND1P20-201ENST00000430341 950 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 BX119904.1-201ENST00000432026 348 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 ZNF886P-201ENST00000450781 723 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC112187.1-201ENST00000455837 479 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 PSMC1P13-201ENST00000458195 985 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC096741.1-201ENST00000472250 846 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 RAP1BP2-201ENST00000478270 544 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 PPM1AP1-201ENST00000502740 1135 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC008427.1-201ENST00000503102 655 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC112518.2-201ENST00000508565 425 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC121161.1-201ENST00000510606 652 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 RNA5SP400-201ENST00000517155 111 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC091163.3-201ENST00000518269 1144 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 RPA2P3-201ENST00000533268 770 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC019322.1-201ENST00000571869 389 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL078601.3-201ENST00000573303 535 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 SMIM12P1-201ENST00000603004 274 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC012557.1-201ENST00000607115 611 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 OR7A19P-201ENST00000608051 733 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC021851.1-201ENST00000608537 1082 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC011472.4-201ENST00000615848 491 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC009318.3-201ENST00000616916 503 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 MIR6729-201ENST00000618194 65 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC073488.6-201ENST00000632293 754 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC003992.1-201ENST00000635364 557 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LINC02211-204ENST00000642024 1070 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 AC096656.1-201ENST00000623826 1364 ntBASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
SIMC1Q8NDZ2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
SIMC1Q8NDZ2 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms