Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 AC018809.2-201ENST00000602436 3823 ntBASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.04□□□□□ -1.6
LINC00346Q8IVM7 AC140134.1-201ENST00000511830 3544 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 HSPD1P11-201ENST00000508643 1702 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC068870.1-201ENST00000563737 2455 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL118496.1-201ENST00000440201 1812 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 MIR16-2-201ENST00000362117 81 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 RNA5SP477-201ENST00000362639 119 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 RNA5SP326-201ENST00000363209 110 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 MIR142-201ENST00000384835 87 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 RNU11-201ENST00000387069 134 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 RNU4-27P-201ENST00000410889 139 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL158825.1-201ENST00000414735 521 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC012497.1-201ENST00000429392 575 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC099670.2-201ENST00000435130 321 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 MED6P1-201ENST00000439659 713 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC005165.2-201ENST00000466070 380 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 RPL21P47-201ENST00000483696 477 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC005912.1-201ENST00000495392 255 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC016550.1-201ENST00000505348 785 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 GAPDHP62-201ENST00000515313 990 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AP002812.4-201ENST00000532139 286 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC137627.1-201ENST00000545761 289 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC026826.3-201ENST00000561747 158 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC009962.1-201ENST00000567327 3813 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC106734.1-201ENST00000568646 663 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL360012.1-201ENST00000602813 131 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC123786.2-201ENST00000603459 275 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 OR2BH1P-201ENST00000608850 864 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC112503.2-201ENST00000609005 552 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AP000943.4-201ENST00000622912 357 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AC011815.3-201ENST00000624194 473 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 AP000756.2-201ENST00000624168 2567 ntBASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
LINC00346Q8IVM7 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 NCSTNP1-201ENST00000406229 144 ntBASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 GSTM3P2-201ENST00000412746 530 ntBASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 RPL6P29-201ENST00000414863 865 ntBASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 AC069154.1-201ENST00000432914 542 ntBASIC5.02□□□□□ -1.61
LINC00346Q8IVM7 AL512661.1-201ENST00000434586 1253 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms