Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNORA70.9-201ENST00000384370 135 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL121977.1-201ENST00000401636 979 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 LYPLA1P3-201ENST00000402650 695 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC016739.1-201ENST00000405359 345 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC046176.1-201ENST00000435260 1170 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL031667.1-201ENST00000440222 725 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC073052.1-201ENST00000440417 714 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 DNAJC19P5-201ENST00000443295 316 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 EEF1B2P5-201ENST00000444820 548 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 MTND2P19-201ENST00000449129 1012 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 OR52E7P-201ENST00000452394 933 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 MTCO2P18-201ENST00000457151 658 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC004129.2-201ENST00000457229 287 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC010374.1-201ENST00000503762 1237 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC093755.1-201ENST00000512950 1023 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AP000926.4-201ENST00000527351 454 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AP003461.1-201ENST00000528866 78 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC095055.1-201ENST00000603472 1113 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC002069.2-201ENST00000603580 883 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC079880.2-201ENST00000603790 1213 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC009237.12-201ENST00000604755 742 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 RPL12P48-201ENST00000605620 304 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC239868.4-201ENST00000608318 671 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC245297.2-201ENST00000610119 565 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC096586.2-201ENST00000610260 441 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL355073.2-201ENST00000612106 557 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL445670.1-201ENST00000618889 801 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 FRG1DP-201ENST00000635586 771 ntBASIC5.75□□□□□ -1.49
VRK3Q8IV63 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
VRK3Q8IV63 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.75□□□□□ -1.49
VRK3Q8IV63 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC104454.1-201ENST00000421341 1401 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 Y_RNA.51-201ENST00000362725 102 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VRK3Q8IV63 RNU5A-2P-201ENST00000384337 116 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 RN7SKP29-201ENST00000410957 272 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 RNU4-22P-201ENST00000411058 166 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.74□□□□□ -1.49
VRK3Q8IV63 CDY8P-201ENST00000428380 1279 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 AC090018.1-201ENST00000434369 367 ntBASIC5.74□□□□□ -1.49
VRK3Q8IV63 SUMO2P8-201ENST00000434672 286 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms