Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 RPSAP39-201ENST00000467439 883 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC093827.1-201ENST00000480094 861 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC015720.2-201ENST00000567709 334 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC007620.3-201ENST00000608131 497 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 OR51C1P-201ENST00000608504 942 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC004477.3-201ENST00000614061 590 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 RMST_5.1-201ENST00000618704 126 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 BANCR-201ENST00000624238 473 ntTSL 2 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 TTC39DP-201ENST00000416781 1688 ntBASIC4.88□□□□□ -1.63
NIPAL3Q6P499 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NIPAL3Q6P499 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RNU6-618P-201ENST00000363518 112 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RNA5SP242-201ENST00000364171 118 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RN7SKP124-201ENST00000364730 341 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 DBIP1-201ENST00000401435 260 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RPL21P67-201ENST00000402896 478 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RPL10P10-201ENST00000403509 664 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 COX5BP7-201ENST00000414780 274 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AL513325.1-201ENST00000417716 1034 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC013470.3-201ENST00000420252 1194 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 NPM1P26-201ENST00000426339 738 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 BUD31P2-201ENST00000449374 300 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 CCRL1P1-201ENST00000449542 1053 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 GAPDHP14-201ENST00000450472 937 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 MTND3P6-201ENST00000485242 339 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 OR9N1P-201ENST00000491296 333 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RPS24P16-201ENST00000497294 392 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 RN7SL466P-201ENST00000497546 295 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 OR52A4P-203ENST00000498233 1014 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 MYL12BP2-201ENST00000503948 512 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC109464.1-201ENST00000511091 819 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 SNORD95-201ENST00000579879 68 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC127024.5-201ENST00000580085 462 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 Z95327.3-201ENST00000610385 572 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AL133370.2-201ENST00000619934 439 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.87□□□□□ -1.63
NIPAL3Q6P499 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
NIPAL3Q6P499 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NIPAL3Q6P499 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms