Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
RFX7Q2KHR2 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AC002525.1-201ENST00000624392 1622 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 MTHFD2P5-201ENST00000320415 844 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AL353625.1-202ENST00000366273 571 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 SNORA56-201ENST00000383966 129 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 RNA5SP187-201ENST00000384400 119 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 CHMP1B2P-201ENST00000399581 597 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 U3.32-201ENST00000408116 212 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AL772161.1-201ENST00000439130 476 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 SNRPCP3-201ENST00000474888 476 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 BRD9P1-201ENST00000529855 560 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AC100827.5-201ENST00000615883 426 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 AC093671.1-201ENST00000624981 2929 ntBASIC6.21□□□□□ -1.41
RFX7Q2KHR2 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
RFX7Q2KHR2 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 MIPEPP2-201ENST00000422560 1819 ntBASIC6.21□□□□□ -1.42
RFX7Q2KHR2 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
RFX7Q2KHR2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 RPS29P9-201ENST00000440360 171 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 AC092324.1-201ENST00000468671 324 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 DUBR-205ENST00000495228 411 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 AC100784.1-201ENST00000522790 310 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 AC006349.1-201ENST00000555526 235 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 MEMO1P5-201ENST00000604810 406 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 MIR6820-201ENST00000611508 62 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 AC004158.1-201ENST00000564508 4319 ntBASIC6.2□□□□□ -1.42
RFX7Q2KHR2 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
RFX7Q2KHR2 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 RN7SKP113-201ENST00000363891 295 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 RNU6-316P-201ENST00000391027 107 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 ELOCP3-201ENST00000439303 348 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AL354714.3-201ENST00000447284 493 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 RNA5SP228-201ENST00000516232 133 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 MIR4480-201ENST00000582492 71 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AL353662.3-201ENST00000625131 237 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AL360270.2-201ENST00000562952 5985 ntBASIC6.19□□□□□ -1.42
RFX7Q2KHR2 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RFX7Q2KHR2 SNORA2.3-201ENST00000383920 135 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AL139128.1-201ENST00000413921 941 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 ENPP7P11-201ENST00000505915 627 ntBASIC6.18□□□□□ -1.42
RFX7Q2KHR2 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC6.18□□□□□ -1.42
RFX7Q2KHR2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms