Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 OR7E10P-201ENST00000526420 991 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC5.18□□□□□ -1.58
LTBQ06643 AC139697.1-201ENST00000548429 745 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.18□□□□□ -1.58
LTBQ06643 DUXAP10-204ENST00000612052 616 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AC093783.1-201ENST00000612976 329 ntBASIC5.18□□□□□ -1.58
LTBQ06643 AC009159.2-201ENST00000617603 606 ntBASIC5.18□□□□□ -1.58
LTBQ06643 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.18□□□□□ -1.58
LTBQ06643 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.18□□□□□ -1.58
LTBQ06643 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.18□□□□□ -1.58
LTBQ06643 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LTBQ06643 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 AC109446.4-201ENST00000623235 2755 ntBASIC5.17□□□□□ -1.58
LTBQ06643 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
LTBQ06643 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 AL159987.1-201ENST00000347911 293 ntBASIC5.17□□□□□ -1.58
LTBQ06643 MIR130A-201ENST00000385274 89 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC096921.1-201ENST00000411661 375 ntBASIC5.17□□□□□ -1.58
LTBQ06643 NIFKP3-201ENST00000417799 865 ntBASIC5.17□□□□□ -1.58
LTBQ06643 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 RPA2P2-201ENST00000419698 796 ntBASIC5.17□□□□□ -1.58
LTBQ06643 RPL34P3-201ENST00000421454 338 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.17□□□□□ -1.58
LTBQ06643 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC126120.1-201ENST00000431082 470 ntBASIC5.17□□□□□ -1.58
LTBQ06643 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.17□□□□□ -1.58
LTBQ06643 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.17□□□□□ -1.58
LTBQ06643 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 AL133445.1-201ENST00000467051 452 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC073610.1-201ENST00000489971 396 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 DUTP7-201ENST00000507982 486 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.17□□□□□ -1.58
LTBQ06643 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.17□□□□□ -1.58
LTBQ06643 HMGN2P36-201ENST00000529541 409 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AP000648.1-201ENST00000529682 397 ntBASIC5.17□□□□□ -1.58
LTBQ06643 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.17□□□□□ -1.58
LTBQ06643 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 AC137627.1-201ENST00000545761 289 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.17□□□□□ -1.58
LTBQ06643 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.17□□□□□ -1.58
LTBQ06643 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.17□□□□□ -1.58
LTBQ06643 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.17□□□□□ -1.58
LTBQ06643 DHFRP1-201ENST00000579682 559 ntBASIC5.17□□□□□ -1.58
LTBQ06643 COX6CP7-201ENST00000597056 208 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AL031601.1-201ENST00000605702 394 ntBASIC5.17□□□□□ -1.58
LTBQ06643 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC5.17□□□□□ -1.58
LTBQ06643 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 AL590763.1-201ENST00000398297 1545 ntBASIC5.17□□□□□ -1.58
LTBQ06643 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
LTBQ06643 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LTBQ06643 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LTBQ06643 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
LTBQ06643 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.16□□□□□ -1.58
LTBQ06643 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
LTBQ06643 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.16□□□□□ -1.58
LTBQ06643 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.16□□□□□ -1.58
LTBQ06643 MIR133A2-201ENST00000347538 102 ntBASIC5.16□□□□□ -1.58
LTBQ06643 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
LTBQ06643 RPL11P3-201ENST00000395256 523 ntBASIC5.16□□□□□ -1.58
LTBQ06643 ANAPC10P1-201ENST00000395991 556 ntBASIC5.16□□□□□ -1.58
LTBQ06643 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.16□□□□□ -1.58
LTBQ06643 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.16□□□□□ -1.58
LTBQ06643 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.16□□□□□ -1.58
LTBQ06643 RCC2P2-201ENST00000422174 918 ntBASIC5.16□□□□□ -1.58
LTBQ06643 MTND4P24-201ENST00000424002 397 ntBASIC5.16□□□□□ -1.58
LTBQ06643 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.16□□□□□ -1.58
LTBQ06643 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms