Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLDN6P56747 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
CLDN6P56747 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN6P56747 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN6P56747 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN6P56747 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN6P56747 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 AC016745.2-201ENST00000608834 3443 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 RNA5SP87-201ENST00000384155 118 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLDN6P56747 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 CHEK2P3-201ENST00000416118 248 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 P2RY10P2-201ENST00000416730 913 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 COX6CP17-201ENST00000421389 185 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 MRPS21P2-201ENST00000424704 264 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 AL606490.8-201ENST00000441624 319 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 AC012512.1-201ENST00000446594 718 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 AC108751.3-201ENST00000461814 1020 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 SNRPCP3-201ENST00000474888 476 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 RPL23AP72-201ENST00000492447 435 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 GTF2F2P1-201ENST00000511083 675 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN6P56747 AC008033.2-201ENST00000542626 177 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN6P56747 H3F3BP2-201ENST00000583907 357 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 AL023583.1-201ENST00000607518 1143 ntBASIC5.07□□□□□ -1.6
CLDN6P56747 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.07□□□□□ -1.6
CLDN6P56747 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.07□□□□□ -1.6
CLDN6P56747 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CLDN6P56747 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLDN6P56747 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLDN6P56747 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 AC009962.1-201ENST00000567327 3813 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN6P56747 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN6P56747 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 THAP12P4-201ENST00000528321 2266 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 RPL32P3-201ENST00000359025 275 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 RN7SKP149-201ENST00000363008 344 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 AL590139.1-201ENST00000416267 400 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 REG1CP-206ENST00000447469 496 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 HMGN2P25-201ENST00000486956 268 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CLDN6P56747 AC111000.6-201ENST00000514471 709 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 AC011487.3-201ENST00000593607 453 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 AC104687.2-201ENST00000604442 342 ntBASIC5.06□□□□□ -1.6
CLDN6P56747 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.06□□□□□ -1.6
CLDN6P56747 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.06□□□□□ -1.6
CLDN6P56747 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CLDN6P56747 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CLDN6P56747 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
CLDN6P56747 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 CASC19-255ENST00000641733 1385 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
CLDN6P56747 AC092747.4-201ENST00000620519 1861 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CLDN6P56747 RNU1-146P-201ENST00000364015 165 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 RNU6-233P-201ENST00000410845 141 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 AC009506.2-201ENST00000420635 840 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 AL354766.1-201ENST00000423396 542 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 BX276092.6-201ENST00000430476 250 ntBASIC5.05□□□□□ -1.6
CLDN6P56747 AC099670.2-201ENST00000435130 321 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms