Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 RPS24P8-201ENST00000431490 402 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AL731534.1-201ENST00000434711 269 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 NPM1P13-201ENST00000452663 865 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 DNAJC19P8-201ENST00000452887 259 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC118758.1-202ENST00000454719 225 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC009963.3-201ENST00000458090 486 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AL445687.2-201ENST00000458156 728 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC083795.1-201ENST00000491760 320 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.53□□□□□ -1.52
SUMO3P55854 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC008945.1-201ENST00000505144 499 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 OR7E99P-201ENST00000505750 922 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC005351.1-201ENST00000511152 786 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 HSD3BP3-201ENST00000514706 994 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 RNA5SP116-201ENST00000516132 98 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 MRPS36P3-201ENST00000519284 130 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 AL049779.3-201ENST00000557141 606 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC002310.3-201ENST00000569728 723 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 OR1E3-201ENST00000575608 948 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 MIR4502-201ENST00000580432 81 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AP001542.2-201ENST00000593141 364 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AL583856.2-201ENST00000606298 543 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC097065.2-201ENST00000608159 533 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.53□□□□□ -1.52
SUMO3P55854 AL445423.1-201ENST00000609941 536 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC231759.1-201ENST00000616455 597 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 uc_338.9-201ENST00000617424 182 ntBASIC5.53□□□□□ -1.52
SUMO3P55854 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.53□□□□□ -1.52
SUMO3P55854 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
SUMO3P55854 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.53□□□□□ -1.52
SUMO3P55854 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
SUMO3P55854 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SUMO3P55854 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.52□□□□□ -1.53
SUMO3P55854 GTF2IP4-201ENST00000453092 2054 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 MTND4P31-201ENST00000425607 1343 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.52□□□□□ -1.53
SUMO3P55854 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC5.52□□□□□ -1.53
SUMO3P55854 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 RNA5SP375-201ENST00000362975 119 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 RNA5SP279-201ENST00000365513 117 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.52□□□□□ -1.53
SUMO3P55854 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SUMO3P55854 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 AL096800.1-201ENST00000405326 893 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 MIR1303-201ENST00000408625 86 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 MIR1275-201ENST00000408770 80 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 MYL6P5-201ENST00000412707 459 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC245096.1-201ENST00000413104 546 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 OR5M12P-201ENST00000423388 929 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 RAC1P8-201ENST00000427086 527 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 MTCO3P21-201ENST00000430791 643 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 EEF1B2P3-201ENST00000447718 678 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SUMO3P55854 YRDCP3-201ENST00000456507 480 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.52□□□□□ -1.53
SUMO3P55854 AC021006.1-201ENST00000489849 553 ntBASIC5.52□□□□□ -1.53
SUMO3P55854 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.52□□□□□ -1.53
SUMO3P55854 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms