Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 BX510359.2-201ENST00000417920 305 ntBASIC6.2□□□□□ -1.42
NUP98P52948 AF186996.5-201ENST00000418098 904 ntBASIC6.2□□□□□ -1.42
NUP98P52948 RPS27AP7-201ENST00000422792 455 ntBASIC6.2□□□□□ -1.42
NUP98P52948 AC009238.2-201ENST00000431026 355 ntBASIC6.2□□□□□ -1.42
NUP98P52948 OR52A4P-201ENST00000472867 958 ntBASIC6.2□□□□□ -1.42
NUP98P52948 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.2□□□□□ -1.42
NUP98P52948 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.2□□□□□ -1.42
NUP98P52948 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.2□□□□□ -1.42
NUP98P52948 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.2□□□□□ -1.42
NUP98P52948 AC022884.2-201ENST00000578535 580 ntBASIC6.2□□□□□ -1.42
NUP98P52948 LDHA-225ENST00000625635 141 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NUP98P52948 AC010168.2-201ENST00000562691 5428 ntBASIC6.2□□□□□ -1.42
NUP98P52948 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
NUP98P52948 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 AC026951.1-201ENST00000559530 2459 ntBASIC6.2□□□□□ -1.42
NUP98P52948 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC6.2□□□□□ -1.42
NUP98P52948 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 AC007618.1-201ENST00000366455 732 ntBASIC6.2□□□□□ -1.42
NUP98P52948 SNORA70.10-201ENST00000384515 134 ntBASIC6.2□□□□□ -1.42
NUP98P52948 ATP5HP3-201ENST00000396994 486 ntBASIC6.2□□□□□ -1.42
NUP98P52948 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.2□□□□□ -1.42
NUP98P52948 AC073052.1-201ENST00000440417 714 ntBASIC6.2□□□□□ -1.42
NUP98P52948 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.2□□□□□ -1.42
NUP98P52948 RPL21P133-201ENST00000443666 476 ntBASIC6.2□□□□□ -1.42
NUP98P52948 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 MIR4277-201ENST00000578298 84 ntBASIC6.2□□□□□ -1.42
NUP98P52948 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.2□□□□□ -1.42
NUP98P52948 AC012557.1-201ENST00000607115 611 ntBASIC6.2□□□□□ -1.42
NUP98P52948 AC026367.3-201ENST00000619032 590 ntBASIC6.2□□□□□ -1.42
NUP98P52948 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC6.2□□□□□ -1.42
NUP98P52948 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.19□□□□□ -1.42
NUP98P52948 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NUP98P52948 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP98P52948 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NUP98P52948 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.19□□□□□ -1.42
NUP98P52948 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 GPS2P1-201ENST00000411761 986 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 RPL12P43-201ENST00000420608 499 ntBASIC6.19□□□□□ -1.42
NUP98P52948 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.19□□□□□ -1.42
NUP98P52948 AC021876.1-201ENST00000425959 359 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AC068287.1-201ENST00000430283 295 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AC046176.1-201ENST00000435260 1170 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AC011005.3-201ENST00000491624 395 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP98P52948 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.19□□□□□ -1.42
NUP98P52948 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.19□□□□□ -1.42
NUP98P52948 SOX5P1-201ENST00000524155 1127 ntBASIC6.19□□□□□ -1.42
NUP98P52948 MIR5699-201ENST00000578903 90 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AC010424.2-201ENST00000607594 443 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AC083809.1-201ENST00000615051 472 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AC087821.1-201ENST00000623639 567 ntBASIC6.19□□□□□ -1.42
NUP98P52948 AL592148.3-201ENST00000608771 2646 ntBASIC6.19□□□□□ -1.42
NUP98P52948 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.19□□□□□ -1.42
NUP98P52948 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 AC099654.2-201ENST00000433031 1980 ntBASIC6.19□□□□□ -1.42
NUP98P52948 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
NUP98P52948 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NUP98P52948 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP98P52948 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 AL049693.1-201ENST00000402760 611 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AL136116.2-201ENST00000404020 785 ntBASIC6.18□□□□□ -1.42
NUP98P52948 MAST4-207ENST00000407621 559 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP98P52948 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP98P52948 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP98P52948 AC016772.1-201ENST00000444170 1261 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP98P52948 CYCSP42-201ENST00000450823 238 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP98P52948 NUTF2P7-201ENST00000453086 375 ntBASIC6.18□□□□□ -1.42
NUP98P52948 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC6.18□□□□□ -1.42
NUP98P52948 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.18□□□□□ -1.42
NUP98P52948 RNU2-30P-201ENST00000516209 141 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AL512310.9-201ENST00000553311 948 ntBASIC6.18□□□□□ -1.42
NUP98P52948 AL023583.1-201ENST00000607518 1143 ntBASIC6.18□□□□□ -1.42
NUP98P52948 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP98P52948 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.18□□□□□ -1.42
NUP98P52948 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.18□□□□□ -1.42
NUP98P52948 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
NUP98P52948 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms