Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 PPIAP32-201ENST00000449940 472 ntBASIC5.13□□□□□ -1.59
SOX2P48431 BX276092.8-201ENST00000455722 250 ntBASIC5.13□□□□□ -1.59
SOX2P48431 RPL7P45-201ENST00000455851 743 ntBASIC5.13□□□□□ -1.59
SOX2P48431 RBMY2HP-201ENST00000457961 720 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AL157777.1-201ENST00000468100 304 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC006539.1-201ENST00000481419 501 ntBASIC5.13□□□□□ -1.59
SOX2P48431 RPL12P30-201ENST00000488389 499 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC008629.2-201ENST00000503783 483 ntBASIC5.13□□□□□ -1.59
SOX2P48431 CDH12P2-201ENST00000504393 298 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC008837.1-201ENST00000511513 412 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX2P48431 DUX4L52-201ENST00000549363 777 ntBASIC5.13□□□□□ -1.59
SOX2P48431 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.13□□□□□ -1.59
SOX2P48431 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 GARSP1-201ENST00000570895 719 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC134669.1-201ENST00000581275 672 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.13□□□□□ -1.59
SOX2P48431 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.13□□□□□ -1.59
SOX2P48431 AL445670.1-201ENST00000618889 801 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AL158062.1-201ENST00000619632 745 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC123767.1-202ENST00000620407 817 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC022400.9-201ENST00000623633 273 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC024023.1-201ENST00000624530 922 ntBASIC5.13□□□□□ -1.59
SOX2P48431 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.13□□□□□ -1.59
SOX2P48431 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
SOX2P48431 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 AC017007.4-201ENST00000503353 1352 ntBASIC5.13□□□□□ -1.59
SOX2P48431 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SOX2P48431 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
SOX2P48431 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 AC020633.1-201ENST00000468439 2247 ntBASIC5.12□□□□□ -1.59
SOX2P48431 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 AC125336.1-201ENST00000508893 2827 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC016745.2-201ENST00000608834 3443 ntBASIC5.12□□□□□ -1.59
SOX2P48431 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SOX2P48431 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 ANKRD36P1-201ENST00000344424 659 ntBASIC5.12□□□□□ -1.59
SOX2P48431 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SOX2P48431 SNORA21-201ENST00000362423 132 ntBASIC5.12□□□□□ -1.59
SOX2P48431 RNU1-134P-201ENST00000362935 165 ntBASIC5.12□□□□□ -1.59
SOX2P48431 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 SNORD116-12-201ENST00000384468 92 ntBASIC5.12□□□□□ -1.59
SOX2P48431 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SOX2P48431 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SOX2P48431 DNAJC19P6-201ENST00000401853 280 ntBASIC5.12□□□□□ -1.59
SOX2P48431 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 SLC20A1P1-201ENST00000413906 956 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC5.12□□□□□ -1.59
SOX2P48431 LINC01347-201ENST00000417964 355 ntBASIC5.12□□□□□ -1.59
SOX2P48431 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC5.12□□□□□ -1.59
SOX2P48431 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.12□□□□□ -1.59
SOX2P48431 RPEP4-201ENST00000437636 602 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC096775.1-201ENST00000437724 448 ntBASIC5.12□□□□□ -1.59
SOX2P48431 RPS12P17-201ENST00000438591 377 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 PTGES3P1-201ENST00000439531 483 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC073052.1-201ENST00000440417 714 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.12□□□□□ -1.59
SOX2P48431 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 RPS7P3-201ENST00000443360 580 ntBASIC5.12□□□□□ -1.59
SOX2P48431 AC245291.3-201ENST00000443400 292 ntBASIC5.12□□□□□ -1.59
SOX2P48431 FTLP8-201ENST00000446770 267 ntBASIC5.12□□□□□ -1.59
SOX2P48431 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SOX2P48431 AC002553.3-201ENST00000453002 341 ntBASIC5.12□□□□□ -1.59
SOX2P48431 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SOX2P48431 HSPE1P22-201ENST00000456856 327 ntBASIC5.12□□□□□ -1.59
SOX2P48431 RNU1-88P-201ENST00000459274 128 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms