Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 AGGF1P9-201ENST00000561884 913 ntBASIC5.37□□□□□ -1.55
SLC1A1P43005 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.37□□□□□ -1.55
SLC1A1P43005 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC1A1P43005 AL359513.1-201ENST00000614364 557 ntBASIC5.37□□□□□ -1.55
SLC1A1P43005 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC1A1P43005 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC1A1P43005 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
SLC1A1P43005 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
SLC1A1P43005 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.37□□□□□ -1.55
SLC1A1P43005 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.37□□□□□ -1.55
SLC1A1P43005 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
SLC1A1P43005 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
SLC1A1P43005 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SLC1A1P43005 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
SLC1A1P43005 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC1A1P43005 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 RNA5SP183-201ENST00000362452 119 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 MIR143-201ENST00000385300 106 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AL050305.1-201ENST00000399993 1230 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 MIR1282-201ENST00000408865 101 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC1A1P43005 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC1A1P43005 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC007386.1-201ENST00000455212 582 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 RN7SL443P-201ENST00000464331 290 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 AC135999.1-201ENST00000478962 479 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC015864.1-201ENST00000496512 544 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 RNU6-1334P-201ENST00000516032 105 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC1A1P43005 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.36□□□□□ -1.55
SLC1A1P43005 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC020978.7-201ENST00000575953 1187 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 RPSAP73-201ENST00000614820 330 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AL731532.2-201ENST00000623542 1953 ntBASIC5.36□□□□□ -1.55
SLC1A1P43005 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
SLC1A1P43005 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
SLC1A1P43005 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
SLC1A1P43005 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
SLC1A1P43005 SOCS5P3-201ENST00000425115 1576 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC011447.7-201ENST00000624228 1590 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC1A1P43005 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
SLC1A1P43005 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC235565.1-201ENST00000456962 1325 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
SLC1A1P43005 MIR600-201ENST00000385007 98 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 SNORA17A-201ENST00000391185 133 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC104843.2-201ENST00000427666 297 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC1A1P43005 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC023141.9-201ENST00000458734 412 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 RPSAP39-201ENST00000467439 883 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 RN7SL717P-201ENST00000478343 297 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC090568.1-201ENST00000509499 856 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.35□□□□□ -1.55
SLC1A1P43005 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.35□□□□□ -1.55
SLC1A1P43005 EIF4A2P5-201ENST00000529914 499 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 AC134349.2-201ENST00000535136 910 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 AC024940.3-201ENST00000538551 316 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 AC116553.2-201ENST00000564203 463 ntBASIC5.35□□□□□ -1.55
SLC1A1P43005 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.35□□□□□ -1.55
SLC1A1P43005 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms