Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 ARL2BPP10-201ENST00000446487 531 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 RPL7AP52-201ENST00000458096 790 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 AC093824.1-201ENST00000508796 343 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC6.51□□□□□ -1.37
COL18A1P39060 AC138701.1-201ENST00000524329 714 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.51□□□□□ -1.37
COL18A1P39060 AC025857.2-201ENST00000602711 238 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 AC005191.1-201ENST00000603950 358 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.51□□□□□ -1.37
COL18A1P39060 AC007786.3-201ENST00000615154 596 ntBASIC6.51□□□□□ -1.37
COL18A1P39060 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
COL18A1P39060 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COL18A1P39060 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COL18A1P39060 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL18A1P39060 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COL18A1P39060 PCDH15-230ENST00000617051 7048 ntTSL 5 BASIC6.51□□□□□ -1.37
COL18A1P39060 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COL18A1P39060 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL18A1P39060 AP000547.3-204ENST00000588548 2523 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.5□□□□□ -1.37
COL18A1P39060 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.5□□□□□ -1.37
COL18A1P39060 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.5□□□□□ -1.37
COL18A1P39060 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 MIR298-201ENST00000401212 88 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 AL357515.1-201ENST00000402967 542 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COL18A1P39060 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.5□□□□□ -1.37
COL18A1P39060 AL450023.3-201ENST00000440592 271 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 AC011276.1-201ENST00000469688 323 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.5□□□□□ -1.37
COL18A1P39060 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.5□□□□□ -1.37
COL18A1P39060 AC116553.2-201ENST00000564203 463 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.5□□□□□ -1.37
COL18A1P39060 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.5□□□□□ -1.37
COL18A1P39060 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COL18A1P39060 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.5□□□□□ -1.37
COL18A1P39060 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 ARNTL2-207ENST00000542388 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 MTCO1P15-201ENST00000529569 1526 ntBASIC6.5□□□□□ -1.37
COL18A1P39060 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.5□□□□□ -1.37
COL18A1P39060 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COL18A1P39060 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COL18A1P39060 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 RPL21P108-201ENST00000413857 481 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 AL158827.1-201ENST00000416300 391 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 RPL10P17-201ENST00000453852 316 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.49□□□□□ -1.37
COL18A1P39060 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.49□□□□□ -1.37
COL18A1P39060 SNORA70.11-201ENST00000515987 138 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 SNORA70.13-201ENST00000516116 138 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 AC069366.1-201ENST00000583159 838 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC6.49□□□□□ -1.37
COL18A1P39060 AC073091.2-201ENST00000603205 907 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
COL18A1P39060 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL18A1P39060 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC6.49□□□□□ -1.37
COL18A1P39060 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COL18A1P39060 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
COL18A1P39060 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC6.49□□□□□ -1.37
COL18A1P39060 LINC02035-201ENST00000610128 5476 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC6.49□□□□□ -1.37
COL18A1P39060 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
COL18A1P39060 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC6.49□□□□□ -1.37
COL18A1P39060 RPL17P36-201ENST00000420302 549 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.49□□□□□ -1.37
COL18A1P39060 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC6.49□□□□□ -1.37
COL18A1P39060 KPNA2P3-201ENST00000584190 848 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.49□□□□□ -1.37
COL18A1P39060 AL356218.2-201ENST00000605264 187 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 FAM27B-201ENST00000610601 213 ntBASIC6.49□□□□□ -1.37
COL18A1P39060 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.49□□□□□ -1.37
COL18A1P39060 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COL18A1P39060 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.48□□□□□ -1.37
COL18A1P39060 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.48□□□□□ -1.37
COL18A1P39060 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL18A1P39060 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
COL18A1P39060 NNT-201ENST00000264663 6483 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL18A1P39060 EBLN2-201ENST00000533473 1679 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
COL18A1P39060 SNORA73.1-201ENST00000363107 205 ntBASIC6.48□□□□□ -1.37
COL18A1P39060 SNORA57.1-201ENST00000391227 145 ntBASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms