Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.11□□□□□ -1.59
RORAP35398 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.11□□□□□ -1.59
RORAP35398 AC005341.1-201ENST00000571086 708 ntBASIC5.11□□□□□ -1.59
RORAP35398 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.11□□□□□ -1.59
RORAP35398 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.11□□□□□ -1.59
RORAP35398 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 AL445222.1-201ENST00000607259 628 ntBASIC5.11□□□□□ -1.59
RORAP35398 AL356752.1-201ENST00000615844 593 ntBASIC5.11□□□□□ -1.59
RORAP35398 AC118658.2-201ENST00000618697 459 ntBASIC5.11□□□□□ -1.59
RORAP35398 MIR6730-201ENST00000622213 67 ntBASIC5.11□□□□□ -1.59
RORAP35398 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 CASC19-222ENST00000641321 1173 ntBASIC5.11□□□□□ -1.59
RORAP35398 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.11□□□□□ -1.59
RORAP35398 AC079097.1-201ENST00000512187 1399 ntBASIC5.11□□□□□ -1.59
RORAP35398 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 HCFC2P1-201ENST00000392864 1592 ntBASIC5.11□□□□□ -1.59
RORAP35398 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
RORAP35398 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RORAP35398 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 RPL23P2-201ENST00000320371 421 ntBASIC5.1□□□□□ -1.59
RORAP35398 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.1□□□□□ -1.59
RORAP35398 U3.28-201ENST00000391249 210 ntBASIC5.1□□□□□ -1.59
RORAP35398 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 DUTP5-201ENST00000406790 469 ntBASIC5.1□□□□□ -1.59
RORAP35398 RN7SKP213-201ENST00000410746 298 ntBASIC5.1□□□□□ -1.59
RORAP35398 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.1□□□□□ -1.59
RORAP35398 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RORAP35398 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.1□□□□□ -1.59
RORAP35398 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.1□□□□□ -1.59
RORAP35398 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AC073465.2-201ENST00000440938 498 ntBASIC5.1□□□□□ -1.59
RORAP35398 RPS11P7-201ENST00000442125 465 ntBASIC5.1□□□□□ -1.59
RORAP35398 AC004453.1-201ENST00000487895 408 ntBASIC5.1□□□□□ -1.59
RORAP35398 RN7SL808P-201ENST00000496066 299 ntBASIC5.1□□□□□ -1.59
RORAP35398 SNRPCP2-201ENST00000504370 475 ntBASIC5.1□□□□□ -1.59
RORAP35398 USP9YP2-201ENST00000504503 1000 ntBASIC5.1□□□□□ -1.59
RORAP35398 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.1□□□□□ -1.59
RORAP35398 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.1□□□□□ -1.59
RORAP35398 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.1□□□□□ -1.59
RORAP35398 AC109464.1-201ENST00000511091 819 ntBASIC5.1□□□□□ -1.59
RORAP35398 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.1□□□□□ -1.59
RORAP35398 USP9YP1-201ENST00000513521 1002 ntBASIC5.1□□□□□ -1.59
RORAP35398 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AP004607.2-201ENST00000533949 322 ntBASIC5.1□□□□□ -1.59
RORAP35398 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
RORAP35398 OR11J2P-201ENST00000555298 907 ntBASIC5.1□□□□□ -1.59
RORAP35398 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.1□□□□□ -1.59
RORAP35398 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.1□□□□□ -1.59
RORAP35398 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AL139124.1-201ENST00000609123 421 ntBASIC5.1□□□□□ -1.59
RORAP35398 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.1□□□□□ -1.59
RORAP35398 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AC068870.2-201ENST00000620635 389 ntBASIC5.1□□□□□ -1.59
RORAP35398 uc_338.7-201ENST00000621834 124 ntBASIC5.1□□□□□ -1.59
RORAP35398 AL078621.3-201ENST00000623707 2042 ntBASIC5.1□□□□□ -1.59
RORAP35398 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.1□□□□□ -1.59
RORAP35398 CYP4F35P-202ENST00000636121 390 ntBASIC5.1□□□□□ -1.59
RORAP35398 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RORAP35398 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
RORAP35398 SMG1P7-201ENST00000565246 2704 ntBASIC5.1□□□□□ -1.59
RORAP35398 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.09□□□□□ -1.59
RORAP35398 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 AL513548.1-201ENST00000562904 1724 ntBASIC5.09□□□□□ -1.59
RORAP35398 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RORAP35398 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RORAP35398 AC092376.2-201ENST00000622621 4116 ntBASIC5.09□□□□□ -1.59
RORAP35398 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.09□□□□□ -1.59
RORAP35398 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 RN7SKP185-201ENST00000362813 326 ntBASIC5.09□□□□□ -1.59
RORAP35398 RNU1-43P-201ENST00000365052 165 ntBASIC5.09□□□□□ -1.59
RORAP35398 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RORAP35398 RNU1-106P-201ENST00000384382 164 ntBASIC5.09□□□□□ -1.59
RORAP35398 SNORD56.6-201ENST00000384569 71 ntBASIC5.09□□□□□ -1.59
RORAP35398 MIR937-201ENST00000401271 86 ntBASIC5.09□□□□□ -1.59
RORAP35398 DBIP1-201ENST00000401435 260 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms