Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 CR788268.1-201ENST00000603931 1809 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 THAP12P5-201ENST00000405864 2275 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 MIR133B-201ENST00000362210 119 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 RN7SKP162-201ENST00000363605 345 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 RNU1-146P-201ENST00000364015 165 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 HSPA8P15-201ENST00000401676 786 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 Z93019.1-201ENST00000416450 973 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 RPL12P17-201ENST00000432393 498 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC105399.1-202ENST00000447303 205 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 AL591623.2-201ENST00000449978 222 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 RANP1-206ENST00000455094 651 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AP000942.1-201ENST00000463969 747 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 RPL35AP19-201ENST00000469425 329 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 OR2AO1P-201ENST00000476497 403 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 RN7SL814P-201ENST00000487715 300 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 RN7SL547P-201ENST00000490793 290 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AC138409.2-202ENST00000507274 458 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 HMGB1P44-201ENST00000508597 572 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4□□□□□ -1.77
HLA-DMBP28068 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 AC010245.2-201ENST00000606908 1167 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AC000068.2-201ENST00000608816 460 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 BX323046.1-201ENST00000610145 535 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AC005840.5-201ENST00000619166 599 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 MIR8080-201ENST00000622224 89 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 AC132825.8-201ENST00000640783 297 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DMBP28068 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4□□□□□ -1.77
HLA-DMBP28068 TTC39DP-201ENST00000416781 1688 ntBASIC4□□□□□ -1.77
HLA-DMBP28068 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
HLA-DMBP28068 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4□□□□□ -1.77
HLA-DMBP28068 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
HLA-DMBP28068 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AMELX-201ENST00000348912 737 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 RNA5SP234-201ENST00000363916 119 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 MIR589-201ENST00000385238 99 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AP000534.2-201ENST00000412729 568 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 COX5BP7-201ENST00000414780 274 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 AL355433.1-201ENST00000422804 300 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
HLA-DMBP28068 PRUNEP1-201ENST00000425846 705 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 CFL1P1-202ENST00000432948 411 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 NPM1P33-201ENST00000438918 872 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AL606490.1-201ENST00000452266 765 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 CBX1P5-201ENST00000475330 559 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 RPL7P39-201ENST00000481157 744 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 RN7SL423P-201ENST00000486202 304 ntBASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.99□□□□□ -1.77
HLA-DMBP28068 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms