Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 TDGF1P6-201ENST00000463873 448 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 RPL5P12-201ENST00000477071 851 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC009269.1-202ENST00000484381 469 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 RN7SL153P-201ENST00000486501 292 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 RN7SL170P-201ENST00000487098 295 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC114797.1-201ENST00000514003 728 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC022634.1-201ENST00000520765 532 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 SNX18P27-201ENST00000523611 779 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC005363.1-201ENST00000530779 351 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC244034.2-201ENST00000562504 509 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AL845331.3-202ENST00000562856 261 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 ATP5F1P7-201ENST00000567330 760 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 MIR3682-201ENST00000581338 84 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC010323.2-201ENST00000596405 594 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AL390838.2-201ENST00000602394 274 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC022893.3-201ENST00000607665 437 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC006924.1-201ENST00000610750 559 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC068722.2-201ENST00000618734 544 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC024580.1-201ENST00000623020 674 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC129778.1-202ENST00000623812 261 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC022418.1-201ENST00000624118 445 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 CLUHP10-201ENST00000631979 980 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC110994.2-201ENST00000635481 492 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AL591379.1-207ENST00000635982 261 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 CLDN12-201ENST00000287916 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 AC004941.1-201ENST00000417506 3120 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 AC010928.1-201ENST00000592477 1447 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC073525.1-203ENST00000547040 2631 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 RUNDC3A-AS1-202ENST00000588097 5203 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 ARHGAP11A-202ENST00000543522 3152 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 HEATR1-202ENST00000366581 6538 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AL357556.1-201ENST00000421884 1388 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 C14orf37-201ENST00000267485 6495 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 MAPK10-285ENST00000641207 2746 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 ADAM3A-202ENST00000460383 2528 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 AL161891.1-201ENST00000621575 4636 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 GJC1-201ENST00000330514 3295 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
COL8A1P27658 IQUB-201ENST00000324698 2891 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.56□□□□□ -1.36
COL8A1P27658 ADH7-201ENST00000209665 2289 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 WBP1L-201ENST00000369889 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 OSBPL9-202ENST00000371714 3352 ntAPPRIS ALT1 TSL 2 BASIC6.56□□□□□ -1.36
COL8A1P27658 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 AL031985.3-201ENST00000565390 2449 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 ASNSP1-204ENST00000641977 1664 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
COL8A1P27658 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
COL8A1P27658 NUP37-209ENST00000552283 2372 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
COL8A1P27658 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC6.56□□□□□ -1.36
COL8A1P27658 Y_RNA.47-201ENST00000362697 108 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 RNU1-122P-201ENST00000365538 156 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.56□□□□□ -1.36
COL8A1P27658 AC117470.1-201ENST00000381974 330 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
COL8A1P27658 SNORD65-201ENST00000391079 73 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 MIR548M-201ENST00000408260 86 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 RNU6-575P-201ENST00000411326 105 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 SNRPFP1-201ENST00000414761 252 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC6.56□□□□□ -1.36
COL8A1P27658 AL354732.1-204ENST00000421020 755 ntTSL 3 BASIC6.56□□□□□ -1.36
COL8A1P27658 PMCHL1-202ENST00000423102 261 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 RPL37P21-201ENST00000435890 276 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 AC104634.1-201ENST00000452720 462 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC6.56□□□□□ -1.36
COL8A1P27658 AC104339.1-201ENST00000465478 348 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 RN7SL233P-201ENST00000469988 277 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6.56□□□□□ -1.36
COL8A1P27658 AC112206.3-201ENST00000514578 389 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 RNU6-1137P-201ENST00000517073 99 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 RNU6-988P-201ENST00000519081 107 ntBASIC6.56□□□□□ -1.36
COL8A1P27658 AC008708.2-201ENST00000522956 1124 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
COL8A1P27658 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.56□□□□□ -1.36
COL8A1P27658 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms