Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC068870.3-201ENST00000625077 2536 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL8A2P25067 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL8A2P25067 RNA5SP123-201ENST00000363244 119 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 MIR937-201ENST00000401271 86 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AL109941.1-201ENST00000401925 229 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 GPS2P1-201ENST00000411761 986 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC079809.1-201ENST00000415468 276 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AC017078.1-201ENST00000416146 368 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 TRGV5P-201ENST00000419915 354 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.36□□□□□ -1.71
COL8A2P25067 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 DNAJB5P1-201ENST00000454004 806 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.36□□□□□ -1.71
COL8A2P25067 HMGN2P25-201ENST00000486956 268 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.36□□□□□ -1.71
COL8A2P25067 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 GTF2IP11-201ENST00000526931 420 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC019322.1-201ENST00000571869 389 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 MIR7853-201ENST00000584820 132 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AC008814.1-201ENST00000603797 406 ntBASIC4.36□□□□□ -1.71
COL8A2P25067 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
COL8A2P25067 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
COL8A2P25067 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.35□□□□□ -1.71
COL8A2P25067 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 OR9G4-201ENST00000302957 984 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 RN7SKP153-201ENST00000365026 316 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 RPS26P13-201ENST00000419030 330 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 RN7SL244P-201ENST00000493405 297 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 AC021193.1-201ENST00000511607 420 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.35□□□□□ -1.71
COL8A2P25067 CLMN-206ENST00000556441 452 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.35□□□□□ -1.71
COL8A2P25067 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 WAC-209ENST00000428935 1320 ntTSL 2 BASIC4.35□□□□□ -1.71
COL8A2P25067 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 AC004817.4-201ENST00000602396 3625 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
COL8A2P25067 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
COL8A2P25067 AC097063.1-201ENST00000426714 1797 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 AC023421.1-201ENST00000590535 1785 ntBASIC4.35□□□□□ -1.71
COL8A2P25067 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
COL8A2P25067 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 AP005432.1-201ENST00000580891 3485 ntBASIC4.34□□□□□ -1.71
COL8A2P25067 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.34□□□□□ -1.71
COL8A2P25067 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.34□□□□□ -1.71
COL8A2P25067 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
COL8A2P25067 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms