Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
XPAP23025 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 AC008627.1-201ENST00000517511 1704 ntBASIC6.13□□□□□ -1.43
XPAP23025 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 AOX3P-204ENST00000491025 2107 ntBASIC6.13□□□□□ -1.43
XPAP23025 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 LCN1P2-201ENST00000372030 223 ntBASIC6.13□□□□□ -1.43
XPAP23025 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 RNU6-224P-201ENST00000384055 107 ntBASIC6.13□□□□□ -1.43
XPAP23025 AL008987.1-201ENST00000415528 237 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC016907.1-201ENST00000419483 435 ntBASIC6.13□□□□□ -1.43
XPAP23025 BX119904.4-201ENST00000424402 301 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 RPS4XP16-201ENST00000427198 791 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 TRAPPC13P1-201ENST00000435991 1062 ntBASIC6.13□□□□□ -1.43
XPAP23025 PA2G4P6-201ENST00000438325 1197 ntBASIC6.13□□□□□ -1.43
XPAP23025 RPS10P18-201ENST00000442662 495 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC079922.1-201ENST00000443291 359 ntBASIC6.13□□□□□ -1.43
XPAP23025 HSFY3P-201ENST00000444242 1191 ntBASIC6.13□□□□□ -1.43
XPAP23025 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 HMGN1P2-201ENST00000445197 310 ntBASIC6.13□□□□□ -1.43
XPAP23025 SEPT14P24-201ENST00000447236 180 ntBASIC6.13□□□□□ -1.43
XPAP23025 RSL24D1P3-201ENST00000449255 495 ntBASIC6.13□□□□□ -1.43
XPAP23025 ART2BP-201ENST00000453501 499 ntBASIC6.13□□□□□ -1.43
XPAP23025 RPS6P2-201ENST00000454208 705 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC244505.3-201ENST00000454598 187 ntBASIC6.13□□□□□ -1.43
XPAP23025 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 ACA64.1-201ENST00000459171 127 ntBASIC6.13□□□□□ -1.43
XPAP23025 RN7SL165P-201ENST00000477476 291 ntBASIC6.13□□□□□ -1.43
XPAP23025 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 AC004815.1-201ENST00000484185 331 ntBASIC6.13□□□□□ -1.43
XPAP23025 BTG4P1-201ENST00000510421 183 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 RNA5SP434-201ENST00000516647 121 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 AL356057.1-201ENST00000533798 831 ntBASIC6.13□□□□□ -1.43
XPAP23025 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 AC023050.2-201ENST00000544968 387 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC6.13□□□□□ -1.43
XPAP23025 AC125611.1-201ENST00000549563 229 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.13□□□□□ -1.43
XPAP23025 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.13□□□□□ -1.43
XPAP23025 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.13□□□□□ -1.43
XPAP23025 RPA2P1-201ENST00000556557 721 ntBASIC6.13□□□□□ -1.43
XPAP23025 MIR4301-201ENST00000577203 66 ntBASIC6.13□□□□□ -1.43
XPAP23025 PIGPP4-201ENST00000584447 307 ntBASIC6.13□□□□□ -1.43
XPAP23025 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 AC020916.2-201ENST00000591242 360 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC010503.3-201ENST00000594355 540 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC124856.1-201ENST00000600819 896 ntBASIC6.13□□□□□ -1.43
XPAP23025 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 AP002906.1-201ENST00000603405 233 ntBASIC6.13□□□□□ -1.43
XPAP23025 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 AC022400.9-201ENST00000623633 273 ntBASIC6.13□□□□□ -1.43
XPAP23025 MIR3974-201ENST00000637126 96 ntBASIC6.13□□□□□ -1.43
XPAP23025 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 NXF4-202ENST00000416098 1465 ntBASIC6.13□□□□□ -1.43
XPAP23025 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
XPAP23025 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
XPAP23025 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.13□□□□□ -1.43
XPAP23025 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
XPAP23025 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.12□□□□□ -1.43
XPAP23025 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC6.12□□□□□ -1.43
XPAP23025 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 RNU6-236P-201ENST00000363886 106 ntBASIC6.12□□□□□ -1.43
XPAP23025 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
XPAP23025 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
XPAP23025 SNRPEP6-201ENST00000407465 277 ntBASIC6.12□□□□□ -1.43
XPAP23025 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.12□□□□□ -1.43
XPAP23025 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.12□□□□□ -1.43
XPAP23025 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.12□□□□□ -1.43
XPAP23025 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.12□□□□□ -1.43
XPAP23025 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC6.12□□□□□ -1.43
XPAP23025 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.12□□□□□ -1.43
XPAP23025 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 116.8 ms