Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
ERCC3P19447 EEF1A1P33-201ENST00000554413 1362 ntBASIC7.46□□□□□ -1.21
ERCC3P19447 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.46□□□□□ -1.21
ERCC3P19447 TTC41P-205ENST00000551270 3963 ntBASIC7.46□□□□□ -1.21
ERCC3P19447 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
ERCC3P19447 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
ERCC3P19447 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC7.46□□□□□ -1.21
ERCC3P19447 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC7.46□□□□□ -1.21
ERCC3P19447 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC7.46□□□□□ -1.21
ERCC3P19447 AC106872.5-201ENST00000508856 1416 ntBASIC7.46□□□□□ -1.21
ERCC3P19447 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.46□□□□□ -1.21
ERCC3P19447 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.46□□□□□ -1.22
ERCC3P19447 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC7.46□□□□□ -1.22
ERCC3P19447 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 RNA5SP188-201ENST00000362916 129 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 HMGB3P7-201ENST00000400214 611 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 NRBF2P2-201ENST00000413087 861 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC007435.1-201ENST00000421086 415 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 REREP1Y-201ENST00000422655 198 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC7.46□□□□□ -1.22
ERCC3P19447 AL390023.1-201ENST00000428836 262 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 RPL21P110-201ENST00000433345 446 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 REREP2Y-201ENST00000439103 200 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC3P19447 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC3P19447 BX248409.1-201ENST00000455497 255 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC092754.2-201ENST00000463506 460 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC091435.1-201ENST00000505442 584 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 RNA5SP206-201ENST00000516703 121 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 RNU6-759P-201ENST00000516740 103 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC3P19447 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC3P19447 AGGF1P7-201ENST00000562369 913 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 LINC00556-201ENST00000569603 412 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC7.46□□□□□ -1.22
ERCC3P19447 BNIP3P26-201ENST00000600827 554 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 DUXAP11-201ENST00000603858 526 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AC106791.2-201ENST00000604680 391 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 AL354976.1-201ENST00000613843 387 ntBASIC7.46□□□□□ -1.22
ERCC3P19447 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.46□□□□□ -1.22
ERCC3P19447 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.46□□□□□ -1.22
ERCC3P19447 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
ERCC3P19447 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC3P19447 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC3P19447 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
ERCC3P19447 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
ERCC3P19447 BMS1P3-201ENST00000372011 932 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 SNORD116-9-201ENST00000384000 95 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 SNORD116-3-201ENST00000384287 95 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 SNORD116-7-201ENST00000384404 95 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 SNORD116-5-201ENST00000384462 95 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AL590084.2-201ENST00000401481 382 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AL590290.1-201ENST00000405336 380 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC3P19447 RPL7AP14-201ENST00000424041 802 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC3P19447 DPRXP1-201ENST00000426312 460 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC3P19447 AC118469.1-201ENST00000442943 488 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 MTND2P4-201ENST00000445034 1004 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.45□□□□□ -1.22
ERCC3P19447 RPL21P134-201ENST00000453468 483 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC3P19447 SYPL1P1-201ENST00000473622 768 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 MTND3P7-201ENST00000474435 343 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 GAPDHP36-201ENST00000480688 918 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AP002453.1-201ENST00000492327 668 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.45□□□□□ -1.22
ERCC3P19447 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC7.45□□□□□ -1.22
ERCC3P19447 XKRY-201ENST00000510392 1100 ntBASIC7.45□□□□□ -1.22
ERCC3P19447 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC7.45□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms