Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.25□□□□□ -1.57
XRCC1P18887 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.25□□□□□ -1.57
XRCC1P18887 AL731532.2-201ENST00000623542 1953 ntBASIC5.25□□□□□ -1.57
XRCC1P18887 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
XRCC1P18887 AC004817.4-201ENST00000602396 3625 ntBASIC5.25□□□□□ -1.57
XRCC1P18887 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
XRCC1P18887 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
XRCC1P18887 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
XRCC1P18887 OR55B1P-203ENST00000641518 2602 ntBASIC5.25□□□□□ -1.57
XRCC1P18887 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
XRCC1P18887 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 RNU1-149P-201ENST00000390870 161 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 SPTLC1P2-201ENST00000407089 121 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 MTND4LP21-201ENST00000415303 295 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 TRGV7-201ENST00000427089 353 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 BRWD1P3-201ENST00000428816 390 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC245047.2-201ENST00000441060 530 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC012512.1-201ENST00000446594 718 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AL035090.1-201ENST00000454835 332 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC023424.1-201ENST00000496058 459 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.24□□□□□ -1.57
XRCC1P18887 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.24□□□□□ -1.57
XRCC1P18887 RNU6-941P-201ENST00000516346 108 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 RNU4-18P-201ENST00000516751 149 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 YWHABP2-201ENST00000540201 713 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.24□□□□□ -1.57
XRCC1P18887 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.24□□□□□ -1.57
XRCC1P18887 RN7SL356P-201ENST00000582228 248 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.24□□□□□ -1.57
XRCC1P18887 AC069307.1-201ENST00000602820 447 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.24□□□□□ -1.57
XRCC1P18887 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.24□□□□□ -1.57
XRCC1P18887 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 ZNF733P-202ENST00000444809 1573 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 C4BPAP1-201ENST00000415474 1893 ntBASIC5.24□□□□□ -1.57
XRCC1P18887 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.24□□□□□ -1.57
XRCC1P18887 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
XRCC1P18887 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 SNORA48.4-201ENST00000391089 134 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 DBIP1-201ENST00000401435 260 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AC017019.1-201ENST00000426129 261 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.23□□□□□ -1.57
XRCC1P18887 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 UBE2V2P1-201ENST00000434717 398 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.23□□□□□ -1.57
XRCC1P18887 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.23□□□□□ -1.57
XRCC1P18887 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 RPL7P40-201ENST00000481703 745 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.23□□□□□ -1.57
XRCC1P18887 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC5.23□□□□□ -1.57
XRCC1P18887 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.23□□□□□ -1.57
XRCC1P18887 AC100784.1-201ENST00000522790 310 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 RPL10P14-201ENST00000565265 298 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AP001542.1-201ENST00000591314 200 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.23□□□□□ -1.57
XRCC1P18887 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 AC096586.2-201ENST00000610260 441 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AC126915.2-201ENST00000610957 190 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 MIR6719-201ENST00000622428 87 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 AC019072.1-201ENST00000604535 1551 ntBASIC5.23□□□□□ -1.57
XRCC1P18887 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
XRCC1P18887 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
XRCC1P18887 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
XRCC1P18887 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms