Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC6P09630 AC106901.1-201ENST00000425086 698 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC6P09630 AL590399.4-201ENST00000436561 601 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC6P09630 snoU13.20-201ENST00000459180 104 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 RN7SL738P-201ENST00000470264 297 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.98□□□□□ -1.45
HOXC6P09630 AP000797.2-201ENST00000475768 606 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC6P09630 AC012400.1-201ENST00000518452 381 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AC025857.1-201ENST00000525252 377 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.98□□□□□ -1.45
HOXC6P09630 MIR4737-201ENST00000583979 81 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC6P09630 KATNBL1P1-201ENST00000605192 748 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AC138473.1-201ENST00000605717 526 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AC005899.7-201ENST00000618199 588 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 AC253576.2-201ENST00000618815 580 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.98□□□□□ -1.45
HOXC6P09630 AC135068.12-201ENST00000637370 931 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC6P09630 AC104964.3-201ENST00000606115 2860 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC6P09630 NLRP3P1-201ENST00000622303 1785 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
HOXC6P09630 AC026951.1-201ENST00000559530 2459 ntBASIC5.98□□□□□ -1.45
HOXC6P09630 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC6P09630 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.98□□□□□ -1.45
HOXC6P09630 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 OR9K1P-202ENST00000641111 3217 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 AC007996.1-201ENST00000620414 2821 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 AC021876.1-201ENST00000425959 359 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 NPM1P25-201ENST00000429734 854 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AC008072.1-201ENST00000434254 824 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC6P09630 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 AC073072.2-201ENST00000447425 348 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 HMGN2P25-201ENST00000486956 268 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AL133372.1-201ENST00000493565 745 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 RPS24P16-201ENST00000497294 392 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC6P09630 RNA5SP116-201ENST00000516132 98 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AC022360.1-201ENST00000521058 340 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC5.97□□□□□ -1.45
HOXC6P09630 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC5.97□□□□□ -1.45
HOXC6P09630 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 AC009117.1-201ENST00000563948 554 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 AC093388.1-201ENST00000609166 430 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.97□□□□□ -1.45
HOXC6P09630 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 MFSD8-216ENST00000641147 4009 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
HOXC6P09630 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
HOXC6P09630 AC092070.2-203ENST00000598377 3644 ntBASIC5.97□□□□□ -1.45
HOXC6P09630 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
HOXC6P09630 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
HOXC6P09630 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
HOXC6P09630 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HOXC6P09630 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HOXC6P09630 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.96□□□□□ -1.45
HOXC6P09630 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.96□□□□□ -1.46
HOXC6P09630 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
HOXC6P09630 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.96□□□□□ -1.46
HOXC6P09630 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 139.9 ms