Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AP001273.1-201ENST00000624493 3152 ntBASIC4.4□□□□□ -1.7
CD74P04233 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CD74P04233 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CD74P04233 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.4□□□□□ -1.71
CD74P04233 TMSB4XP2-201ENST00000335179 210 ntBASIC4.4□□□□□ -1.71
CD74P04233 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CD74P04233 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 AL035079.1-201ENST00000405210 287 ntBASIC4.4□□□□□ -1.71
CD74P04233 AC013429.2-201ENST00000418798 781 ntBASIC4.4□□□□□ -1.71
CD74P04233 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.4□□□□□ -1.71
CD74P04233 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AC092447.2-201ENST00000435487 669 ntBASIC4.4□□□□□ -1.71
CD74P04233 GAPDHP25-201ENST00000447061 1001 ntBASIC4.4□□□□□ -1.71
CD74P04233 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.4□□□□□ -1.71
CD74P04233 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 AL445433.1-201ENST00000457507 257 ntBASIC4.4□□□□□ -1.71
CD74P04233 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AC068228.1-201ENST00000461723 211 ntBASIC4.4□□□□□ -1.71
CD74P04233 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.4□□□□□ -1.71
CD74P04233 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.4□□□□□ -1.71
CD74P04233 LSM3P4-201ENST00000502948 309 ntBASIC4.4□□□□□ -1.71
CD74P04233 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 SCARNA16.4-201ENST00000516956 187 ntBASIC4.4□□□□□ -1.71
CD74P04233 AC027308.1-201ENST00000517993 110 ntBASIC4.4□□□□□ -1.71
CD74P04233 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC4.4□□□□□ -1.71
CD74P04233 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.4□□□□□ -1.71
CD74P04233 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.4□□□□□ -1.71
CD74P04233 MRPS21P7-201ENST00000566937 238 ntBASIC4.4□□□□□ -1.71
CD74P04233 AC015802.2-201ENST00000589690 189 ntBASIC4.4□□□□□ -1.71
CD74P04233 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.4□□□□□ -1.71
CD74P04233 AC005252.1-201ENST00000604518 1063 ntBASIC4.4□□□□□ -1.71
CD74P04233 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.4□□□□□ -1.71
CD74P04233 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.4□□□□□ -1.71
CD74P04233 AL118522.2-201ENST00000616045 615 ntBASIC4.4□□□□□ -1.71
CD74P04233 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC4.4□□□□□ -1.71
CD74P04233 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.4□□□□□ -1.71
CD74P04233 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.4□□□□□ -1.71
CD74P04233 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CD74P04233 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CD74P04233 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
CD74P04233 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CD74P04233 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CD74P04233 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC4.39□□□□□ -1.71
CD74P04233 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CD74P04233 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 AC063976.2-201ENST00000425667 3556 ntBASIC4.39□□□□□ -1.71
CD74P04233 COX6B1P3-201ENST00000312310 260 ntBASIC4.39□□□□□ -1.71
CD74P04233 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
CD74P04233 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 RNA5SP477-201ENST00000362639 119 ntBASIC4.39□□□□□ -1.71
CD74P04233 RN7SKP269-201ENST00000365545 319 ntBASIC4.39□□□□□ -1.71
CD74P04233 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CD74P04233 SNORA16A-201ENST00000384342 137 ntBASIC4.39□□□□□ -1.71
CD74P04233 RN7SKP125-201ENST00000410481 302 ntBASIC4.39□□□□□ -1.71
CD74P04233 CDY17P-201ENST00000414121 1282 ntBASIC4.39□□□□□ -1.71
CD74P04233 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.39□□□□□ -1.71
CD74P04233 TMBIM7P-201ENST00000418074 855 ntBASIC4.39□□□□□ -1.71
CD74P04233 SRSF1P1-201ENST00000424058 520 ntBASIC4.39□□□□□ -1.71
CD74P04233 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.39□□□□□ -1.71
CD74P04233 AL139148.1-201ENST00000427122 680 ntBASIC4.39□□□□□ -1.71
CD74P04233 CDY8P-201ENST00000428380 1279 ntBASIC4.39□□□□□ -1.71
CD74P04233 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.39□□□□□ -1.71
CD74P04233 GSTM5P1-201ENST00000434751 660 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 AL512637.1-201ENST00000439523 1231 ntBASIC4.39□□□□□ -1.71
CD74P04233 AMYP1-201ENST00000440059 1023 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC005297.1-201ENST00000444765 862 ntBASIC4.39□□□□□ -1.71
CD74P04233 AL450996.1-201ENST00000445574 1202 ntBASIC4.39□□□□□ -1.71
CD74P04233 CDY20P-201ENST00000447528 1279 ntBASIC4.39□□□□□ -1.71
CD74P04233 RPL7L1P1-201ENST00000448259 785 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC011225.1-201ENST00000457751 369 ntBASIC4.39□□□□□ -1.71
CD74P04233 CYCSP34-201ENST00000458172 304 ntBASIC4.39□□□□□ -1.71
CD74P04233 GYG1P1-201ENST00000460864 698 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC112206.1-201ENST00000468416 477 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC090686.1-201ENST00000481577 749 ntBASIC4.39□□□□□ -1.71
CD74P04233 ARL4AP1-201ENST00000503220 705 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.39□□□□□ -1.71
CD74P04233 AC111000.5-201ENST00000506559 1178 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.39□□□□□ -1.71
CD74P04233 ENPP7P9-201ENST00000514456 627 ntBASIC4.39□□□□□ -1.71
CD74P04233 SNORA70.20-201ENST00000516848 126 ntBASIC4.39□□□□□ -1.71
CD74P04233 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.39□□□□□ -1.71
CD74P04233 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms